Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21851 | 65776;65777;65778 | chr2:178583631;178583630;178583629 | chr2:179448358;179448357;179448356 |
N2AB | 20210 | 60853;60854;60855 | chr2:178583631;178583630;178583629 | chr2:179448358;179448357;179448356 |
N2A | 19283 | 58072;58073;58074 | chr2:178583631;178583630;178583629 | chr2:179448358;179448357;179448356 |
N2B | 12786 | 38581;38582;38583 | chr2:178583631;178583630;178583629 | chr2:179448358;179448357;179448356 |
Novex-1 | 12911 | 38956;38957;38958 | chr2:178583631;178583630;178583629 | chr2:179448358;179448357;179448356 |
Novex-2 | 12978 | 39157;39158;39159 | chr2:178583631;178583630;178583629 | chr2:179448358;179448357;179448356 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.953 | N | 0.637 | 0.249 | 0.298745278005 | gnomAD-4.0.0 | 6.86624E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16844E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0732 | likely_benign | 0.0595 | benign | -0.702 | Destabilizing | 0.214 | N | 0.454 | neutral | N | 0.465409534 | None | None | N |
P/C | 0.5278 | ambiguous | 0.3899 | ambiguous | -0.69 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
P/D | 0.5419 | ambiguous | 0.4798 | ambiguous | -0.353 | Destabilizing | 0.995 | D | 0.605 | neutral | None | None | None | None | N |
P/E | 0.3507 | ambiguous | 0.3094 | benign | -0.441 | Destabilizing | 0.995 | D | 0.603 | neutral | None | None | None | None | N |
P/F | 0.5619 | ambiguous | 0.43 | ambiguous | -0.733 | Destabilizing | 0.995 | D | 0.75 | deleterious | None | None | None | None | N |
P/G | 0.4067 | ambiguous | 0.343 | ambiguous | -0.892 | Destabilizing | 0.964 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/H | 0.2948 | likely_benign | 0.2267 | benign | -0.367 | Destabilizing | 1.0 | D | 0.694 | prob.delet. | None | None | None | None | N |
P/I | 0.2816 | likely_benign | 0.2073 | benign | -0.338 | Destabilizing | 0.979 | D | 0.685 | prob.delet. | None | None | None | None | N |
P/K | 0.3683 | ambiguous | 0.3143 | benign | -0.593 | Destabilizing | 0.995 | D | 0.595 | neutral | None | None | None | None | N |
P/L | 0.1499 | likely_benign | 0.117 | benign | -0.338 | Destabilizing | 0.91 | D | 0.727 | deleterious | N | 0.512856764 | None | None | N |
P/M | 0.3454 | ambiguous | 0.2627 | benign | -0.352 | Destabilizing | 0.999 | D | 0.697 | prob.delet. | None | None | None | None | N |
P/N | 0.4269 | ambiguous | 0.3576 | ambiguous | -0.331 | Destabilizing | 0.998 | D | 0.695 | prob.delet. | None | None | None | None | N |
P/Q | 0.2512 | likely_benign | 0.1982 | benign | -0.564 | Destabilizing | 0.998 | D | 0.571 | neutral | N | 0.480351098 | None | None | N |
P/R | 0.2302 | likely_benign | 0.1954 | benign | -0.047 | Destabilizing | 0.993 | D | 0.696 | prob.delet. | N | 0.469248282 | None | None | N |
P/S | 0.157 | likely_benign | 0.1293 | benign | -0.769 | Destabilizing | 0.91 | D | 0.637 | neutral | N | 0.502333126 | None | None | N |
P/T | 0.1039 | likely_benign | 0.0866 | benign | -0.749 | Destabilizing | 0.953 | D | 0.637 | neutral | N | 0.51805194 | None | None | N |
P/V | 0.178 | likely_benign | 0.1372 | benign | -0.423 | Destabilizing | 0.455 | N | 0.628 | neutral | None | None | None | None | N |
P/W | 0.7737 | likely_pathogenic | 0.6799 | pathogenic | -0.814 | Destabilizing | 1.0 | D | 0.696 | prob.delet. | None | None | None | None | N |
P/Y | 0.5589 | ambiguous | 0.4276 | ambiguous | -0.521 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.