Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21866 | 65821;65822;65823 | chr2:178583207;178583206;178583205 | chr2:179447934;179447933;179447932 |
N2AB | 20225 | 60898;60899;60900 | chr2:178583207;178583206;178583205 | chr2:179447934;179447933;179447932 |
N2A | 19298 | 58117;58118;58119 | chr2:178583207;178583206;178583205 | chr2:179447934;179447933;179447932 |
N2B | 12801 | 38626;38627;38628 | chr2:178583207;178583206;178583205 | chr2:179447934;179447933;179447932 |
Novex-1 | 12926 | 39001;39002;39003 | chr2:178583207;178583206;178583205 | chr2:179447934;179447933;179447932 |
Novex-2 | 12993 | 39202;39203;39204 | chr2:178583207;178583206;178583205 | chr2:179447934;179447933;179447932 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | None | None | 0.939 | N | 0.41 | 0.327 | 0.73638873623 | gnomAD-4.0.0 | 6.87581E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66423E-05 |
S/N | rs2048167359 | None | 0.521 | N | 0.286 | 0.108 | 0.222439326576 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/N | rs2048167359 | None | 0.521 | N | 0.286 | 0.108 | 0.222439326576 | gnomAD-4.0.0 | 3.73501E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.10437E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.135 | likely_benign | 0.1295 | benign | -0.105 | Destabilizing | 0.373 | N | 0.306 | neutral | None | None | None | None | N |
S/C | 0.2492 | likely_benign | 0.1998 | benign | -0.217 | Destabilizing | 0.994 | D | 0.369 | neutral | N | 0.496944028 | None | None | N |
S/D | 0.3189 | likely_benign | 0.2526 | benign | 0.043 | Stabilizing | 0.004 | N | 0.125 | neutral | None | None | None | None | N |
S/E | 0.6407 | likely_pathogenic | 0.5609 | ambiguous | -0.058 | Destabilizing | 0.373 | N | 0.277 | neutral | None | None | None | None | N |
S/F | 0.6873 | likely_pathogenic | 0.6259 | pathogenic | -0.762 | Destabilizing | 0.984 | D | 0.385 | neutral | None | None | None | None | N |
S/G | 0.0787 | likely_benign | 0.073 | benign | -0.191 | Destabilizing | 0.001 | N | 0.116 | neutral | N | 0.495903878 | None | None | N |
S/H | 0.5223 | ambiguous | 0.4449 | ambiguous | -0.622 | Destabilizing | 0.984 | D | 0.356 | neutral | None | None | None | None | N |
S/I | 0.5517 | ambiguous | 0.4682 | ambiguous | -0.014 | Destabilizing | 0.939 | D | 0.41 | neutral | N | 0.496597312 | None | None | N |
S/K | 0.7857 | likely_pathogenic | 0.7194 | pathogenic | -0.42 | Destabilizing | 0.742 | D | 0.249 | neutral | None | None | None | None | N |
S/L | 0.2745 | likely_benign | 0.2427 | benign | -0.014 | Destabilizing | 0.854 | D | 0.333 | neutral | None | None | None | None | N |
S/M | 0.4493 | ambiguous | 0.4152 | ambiguous | 0.037 | Stabilizing | 0.996 | D | 0.353 | neutral | None | None | None | None | N |
S/N | 0.1504 | likely_benign | 0.1204 | benign | -0.097 | Destabilizing | 0.521 | D | 0.286 | neutral | N | 0.495210445 | None | None | N |
S/P | 0.1632 | likely_benign | 0.1444 | benign | -0.017 | Destabilizing | 0.953 | D | 0.379 | neutral | None | None | None | None | N |
S/Q | 0.6658 | likely_pathogenic | 0.5965 | pathogenic | -0.329 | Destabilizing | 0.953 | D | 0.366 | neutral | None | None | None | None | N |
S/R | 0.7624 | likely_pathogenic | 0.6767 | pathogenic | -0.186 | Destabilizing | 0.939 | D | 0.381 | neutral | N | 0.49573052 | None | None | N |
S/T | 0.1075 | likely_benign | 0.1043 | benign | -0.181 | Destabilizing | 0.684 | D | 0.288 | neutral | N | 0.476798043 | None | None | N |
S/V | 0.48 | ambiguous | 0.4163 | ambiguous | -0.017 | Destabilizing | 0.953 | D | 0.373 | neutral | None | None | None | None | N |
S/W | 0.7552 | likely_pathogenic | 0.7142 | pathogenic | -0.851 | Destabilizing | 0.996 | D | 0.491 | neutral | None | None | None | None | N |
S/Y | 0.564 | ambiguous | 0.5061 | ambiguous | -0.535 | Destabilizing | 0.984 | D | 0.382 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.