Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21870 | 65833;65834;65835 | chr2:178583195;178583194;178583193 | chr2:179447922;179447921;179447920 |
N2AB | 20229 | 60910;60911;60912 | chr2:178583195;178583194;178583193 | chr2:179447922;179447921;179447920 |
N2A | 19302 | 58129;58130;58131 | chr2:178583195;178583194;178583193 | chr2:179447922;179447921;179447920 |
N2B | 12805 | 38638;38639;38640 | chr2:178583195;178583194;178583193 | chr2:179447922;179447921;179447920 |
Novex-1 | 12930 | 39013;39014;39015 | chr2:178583195;178583194;178583193 | chr2:179447922;179447921;179447920 |
Novex-2 | 12997 | 39214;39215;39216 | chr2:178583195;178583194;178583193 | chr2:179447922;179447921;179447920 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.82 | N | 0.692 | 0.283 | 0.489036454283 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/N | None | None | 0.901 | N | 0.628 | 0.156 | 0.177238962908 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6005 | likely_pathogenic | 0.5336 | ambiguous | 0.031 | Stabilizing | 0.775 | D | 0.653 | neutral | None | None | None | None | N |
K/C | 0.8733 | likely_pathogenic | 0.8327 | pathogenic | -0.366 | Destabilizing | 0.996 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/D | 0.7803 | likely_pathogenic | 0.7321 | pathogenic | -0.023 | Destabilizing | 0.923 | D | 0.669 | neutral | None | None | None | None | N |
K/E | 0.3751 | ambiguous | 0.3152 | benign | -0.035 | Destabilizing | 0.565 | D | 0.648 | neutral | N | 0.510273111 | None | None | N |
K/F | 0.9438 | likely_pathogenic | 0.9229 | pathogenic | -0.319 | Destabilizing | 0.923 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/G | 0.622 | likely_pathogenic | 0.5559 | ambiguous | -0.107 | Destabilizing | 0.775 | D | 0.641 | neutral | None | None | None | None | N |
K/H | 0.4664 | ambiguous | 0.4321 | ambiguous | -0.286 | Destabilizing | 0.989 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/I | 0.7431 | likely_pathogenic | 0.6847 | pathogenic | 0.306 | Stabilizing | 0.82 | D | 0.692 | prob.neutral | N | 0.52158897 | None | None | N |
K/L | 0.6358 | likely_pathogenic | 0.5858 | pathogenic | 0.306 | Stabilizing | 0.011 | N | 0.406 | neutral | None | None | None | None | N |
K/M | 0.4961 | ambiguous | 0.4508 | ambiguous | 0.063 | Stabilizing | 0.923 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/N | 0.5896 | likely_pathogenic | 0.5314 | ambiguous | 0.113 | Stabilizing | 0.901 | D | 0.628 | neutral | N | 0.515873719 | None | None | N |
K/P | 0.8873 | likely_pathogenic | 0.8501 | pathogenic | 0.239 | Stabilizing | 0.961 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/Q | 0.1803 | likely_benign | 0.159 | benign | -0.041 | Destabilizing | 0.075 | N | 0.301 | neutral | N | 0.485377454 | None | None | N |
K/R | 0.1114 | likely_benign | 0.1041 | benign | -0.031 | Destabilizing | 0.008 | N | 0.299 | neutral | N | 0.473525664 | None | None | N |
K/S | 0.6337 | likely_pathogenic | 0.5752 | pathogenic | -0.319 | Destabilizing | 0.775 | D | 0.606 | neutral | None | None | None | None | N |
K/T | 0.3408 | ambiguous | 0.291 | benign | -0.203 | Destabilizing | 0.722 | D | 0.667 | neutral | N | 0.492284783 | None | None | N |
K/V | 0.6676 | likely_pathogenic | 0.608 | pathogenic | 0.239 | Stabilizing | 0.633 | D | 0.639 | neutral | None | None | None | None | N |
K/W | 0.9239 | likely_pathogenic | 0.9028 | pathogenic | -0.392 | Destabilizing | 0.996 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/Y | 0.8424 | likely_pathogenic | 0.8051 | pathogenic | -0.021 | Destabilizing | 0.961 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.