Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21880 | 65863;65864;65865 | chr2:178583165;178583164;178583163 | chr2:179447892;179447891;179447890 |
N2AB | 20239 | 60940;60941;60942 | chr2:178583165;178583164;178583163 | chr2:179447892;179447891;179447890 |
N2A | 19312 | 58159;58160;58161 | chr2:178583165;178583164;178583163 | chr2:179447892;179447891;179447890 |
N2B | 12815 | 38668;38669;38670 | chr2:178583165;178583164;178583163 | chr2:179447892;179447891;179447890 |
Novex-1 | 12940 | 39043;39044;39045 | chr2:178583165;178583164;178583163 | chr2:179447892;179447891;179447890 |
Novex-2 | 13007 | 39244;39245;39246 | chr2:178583165;178583164;178583163 | chr2:179447892;179447891;179447890 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.014 | N | 0.272 | 0.059 | 0.0884992946249 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.21507E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3611 | ambiguous | 0.3076 | benign | -0.69 | Destabilizing | 0.754 | D | 0.459 | neutral | None | None | None | None | N |
N/C | 0.557 | ambiguous | 0.4758 | ambiguous | 0.196 | Stabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
N/D | 0.2024 | likely_benign | 0.1817 | benign | 0.269 | Stabilizing | 0.822 | D | 0.399 | neutral | N | 0.412262909 | None | None | N |
N/E | 0.7178 | likely_pathogenic | 0.6618 | pathogenic | 0.28 | Stabilizing | 0.754 | D | 0.38 | neutral | None | None | None | None | N |
N/F | 0.8814 | likely_pathogenic | 0.8428 | pathogenic | -0.869 | Destabilizing | 0.993 | D | 0.701 | prob.neutral | None | None | None | None | N |
N/G | 0.4766 | ambiguous | 0.4147 | ambiguous | -0.921 | Destabilizing | 0.86 | D | 0.379 | neutral | None | None | None | None | N |
N/H | 0.226 | likely_benign | 0.1939 | benign | -0.785 | Destabilizing | 0.97 | D | 0.485 | neutral | N | 0.482298997 | None | None | N |
N/I | 0.5852 | likely_pathogenic | 0.5259 | ambiguous | -0.148 | Destabilizing | 0.942 | D | 0.687 | prob.neutral | N | 0.498729887 | None | None | N |
N/K | 0.6147 | likely_pathogenic | 0.5557 | ambiguous | 0.088 | Stabilizing | 0.014 | N | 0.272 | neutral | N | 0.444991403 | None | None | N |
N/L | 0.5676 | likely_pathogenic | 0.5107 | ambiguous | -0.148 | Destabilizing | 0.956 | D | 0.525 | neutral | None | None | None | None | N |
N/M | 0.6224 | likely_pathogenic | 0.5709 | pathogenic | 0.264 | Stabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
N/P | 0.5928 | likely_pathogenic | 0.5391 | ambiguous | -0.301 | Destabilizing | 0.978 | D | 0.653 | neutral | None | None | None | None | N |
N/Q | 0.6222 | likely_pathogenic | 0.5635 | ambiguous | -0.443 | Destabilizing | 0.956 | D | 0.465 | neutral | None | None | None | None | N |
N/R | 0.6022 | likely_pathogenic | 0.5496 | ambiguous | 0.123 | Stabilizing | 0.754 | D | 0.406 | neutral | None | None | None | None | N |
N/S | 0.1057 | likely_benign | 0.0977 | benign | -0.38 | Destabilizing | 0.698 | D | 0.423 | neutral | N | 0.415167141 | None | None | N |
N/T | 0.2123 | likely_benign | 0.1941 | benign | -0.189 | Destabilizing | 0.058 | N | 0.246 | neutral | N | 0.397024097 | None | None | N |
N/V | 0.4545 | ambiguous | 0.3994 | ambiguous | -0.301 | Destabilizing | 0.956 | D | 0.556 | neutral | None | None | None | None | N |
N/W | 0.9402 | likely_pathogenic | 0.9275 | pathogenic | -0.714 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | None | None | None | None | N |
N/Y | 0.5025 | ambiguous | 0.4429 | ambiguous | -0.49 | Destabilizing | 0.99 | D | 0.674 | neutral | N | 0.503751705 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.