Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21881 | 65866;65867;65868 | chr2:178583162;178583161;178583160 | chr2:179447889;179447888;179447887 |
N2AB | 20240 | 60943;60944;60945 | chr2:178583162;178583161;178583160 | chr2:179447889;179447888;179447887 |
N2A | 19313 | 58162;58163;58164 | chr2:178583162;178583161;178583160 | chr2:179447889;179447888;179447887 |
N2B | 12816 | 38671;38672;38673 | chr2:178583162;178583161;178583160 | chr2:179447889;179447888;179447887 |
Novex-1 | 12941 | 39046;39047;39048 | chr2:178583162;178583161;178583160 | chr2:179447889;179447888;179447887 |
Novex-2 | 13008 | 39247;39248;39249 | chr2:178583162;178583161;178583160 | chr2:179447889;179447888;179447887 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2048158177 | None | 0.025 | N | 0.206 | 0.128 | 0.326616659874 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs2048158177 | None | 0.025 | N | 0.206 | 0.128 | 0.326616659874 | gnomAD-4.0.0 | 6.57756E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47115E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4989 | ambiguous | 0.4949 | ambiguous | -1.857 | Destabilizing | 0.892 | D | 0.557 | neutral | N | 0.474738306 | None | None | N |
V/C | 0.877 | likely_pathogenic | 0.8737 | pathogenic | -1.579 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
V/D | 0.9866 | likely_pathogenic | 0.9812 | pathogenic | -1.622 | Destabilizing | 0.994 | D | 0.827 | deleterious | N | 0.514811634 | None | None | N |
V/E | 0.9646 | likely_pathogenic | 0.957 | pathogenic | -1.507 | Destabilizing | 0.996 | D | 0.805 | deleterious | None | None | None | None | N |
V/F | 0.6032 | likely_pathogenic | 0.5311 | ambiguous | -1.223 | Destabilizing | 0.967 | D | 0.805 | deleterious | N | 0.467536307 | None | None | N |
V/G | 0.835 | likely_pathogenic | 0.801 | pathogenic | -2.305 | Highly Destabilizing | 0.983 | D | 0.821 | deleterious | N | 0.480071155 | None | None | N |
V/H | 0.9819 | likely_pathogenic | 0.9757 | pathogenic | -1.765 | Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
V/I | 0.0968 | likely_benign | 0.0918 | benign | -0.672 | Destabilizing | 0.025 | N | 0.206 | neutral | N | 0.49093991 | None | None | N |
V/K | 0.9616 | likely_pathogenic | 0.952 | pathogenic | -1.667 | Destabilizing | 0.987 | D | 0.807 | deleterious | None | None | None | None | N |
V/L | 0.5212 | ambiguous | 0.4603 | ambiguous | -0.672 | Destabilizing | 0.369 | N | 0.475 | neutral | N | 0.479048048 | None | None | N |
V/M | 0.4906 | ambiguous | 0.431 | ambiguous | -0.66 | Destabilizing | 0.975 | D | 0.704 | prob.neutral | None | None | None | None | N |
V/N | 0.9669 | likely_pathogenic | 0.9545 | pathogenic | -1.727 | Destabilizing | 0.996 | D | 0.847 | deleterious | None | None | None | None | N |
V/P | 0.9923 | likely_pathogenic | 0.9913 | pathogenic | -1.033 | Destabilizing | 0.996 | D | 0.813 | deleterious | None | None | None | None | N |
V/Q | 0.9523 | likely_pathogenic | 0.9392 | pathogenic | -1.699 | Destabilizing | 0.996 | D | 0.819 | deleterious | None | None | None | None | N |
V/R | 0.9431 | likely_pathogenic | 0.9282 | pathogenic | -1.292 | Destabilizing | 0.996 | D | 0.847 | deleterious | None | None | None | None | N |
V/S | 0.8802 | likely_pathogenic | 0.8557 | pathogenic | -2.398 | Highly Destabilizing | 0.987 | D | 0.801 | deleterious | None | None | None | None | N |
V/T | 0.6873 | likely_pathogenic | 0.6373 | pathogenic | -2.131 | Highly Destabilizing | 0.916 | D | 0.643 | neutral | None | None | None | None | N |
V/W | 0.9908 | likely_pathogenic | 0.987 | pathogenic | -1.49 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
V/Y | 0.9406 | likely_pathogenic | 0.9271 | pathogenic | -1.176 | Destabilizing | 0.987 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.