Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21884 | 65875;65876;65877 | chr2:178583153;178583152;178583151 | chr2:179447880;179447879;179447878 |
N2AB | 20243 | 60952;60953;60954 | chr2:178583153;178583152;178583151 | chr2:179447880;179447879;179447878 |
N2A | 19316 | 58171;58172;58173 | chr2:178583153;178583152;178583151 | chr2:179447880;179447879;179447878 |
N2B | 12819 | 38680;38681;38682 | chr2:178583153;178583152;178583151 | chr2:179447880;179447879;179447878 |
Novex-1 | 12944 | 39055;39056;39057 | chr2:178583153;178583152;178583151 | chr2:179447880;179447879;179447878 |
Novex-2 | 13011 | 39256;39257;39258 | chr2:178583153;178583152;178583151 | chr2:179447880;179447879;179447878 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1350675904 | -0.839 | 0.549 | N | 0.489 | 0.214 | 0.30212335484 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.98E-06 | 0 |
D/N | rs1350675904 | -0.839 | 0.549 | N | 0.489 | 0.214 | 0.30212335484 | gnomAD-4.0.0 | 4.78348E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.59161E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2191 | likely_benign | 0.1816 | benign | -0.301 | Destabilizing | 0.016 | N | 0.416 | neutral | N | 0.488497903 | None | None | N |
D/C | 0.7764 | likely_pathogenic | 0.6869 | pathogenic | 0.016 | Stabilizing | 0.992 | D | 0.615 | neutral | None | None | None | None | N |
D/E | 0.1446 | likely_benign | 0.1268 | benign | -0.484 | Destabilizing | 0.002 | N | 0.221 | neutral | N | 0.398683976 | None | None | N |
D/F | 0.7368 | likely_pathogenic | 0.6694 | pathogenic | 0.013 | Stabilizing | 0.972 | D | 0.603 | neutral | None | None | None | None | N |
D/G | 0.2639 | likely_benign | 0.2223 | benign | -0.596 | Destabilizing | 0.549 | D | 0.472 | neutral | D | 0.534155622 | None | None | N |
D/H | 0.3218 | likely_benign | 0.2572 | benign | -0.088 | Destabilizing | 0.896 | D | 0.546 | neutral | N | 0.481900005 | None | None | N |
D/I | 0.4969 | ambiguous | 0.4189 | ambiguous | 0.451 | Stabilizing | 0.85 | D | 0.595 | neutral | None | None | None | None | N |
D/K | 0.4095 | ambiguous | 0.3263 | benign | 0.139 | Stabilizing | 0.447 | N | 0.467 | neutral | None | None | None | None | N |
D/L | 0.4618 | ambiguous | 0.3865 | ambiguous | 0.451 | Stabilizing | 0.617 | D | 0.544 | neutral | None | None | None | None | N |
D/M | 0.6626 | likely_pathogenic | 0.5904 | pathogenic | 0.706 | Stabilizing | 0.992 | D | 0.605 | neutral | None | None | None | None | N |
D/N | 0.1193 | likely_benign | 0.1115 | benign | -0.323 | Destabilizing | 0.549 | D | 0.489 | neutral | N | 0.478915628 | None | None | N |
D/P | 0.7078 | likely_pathogenic | 0.6933 | pathogenic | 0.225 | Stabilizing | 0.005 | N | 0.352 | neutral | None | None | None | None | N |
D/Q | 0.3236 | likely_benign | 0.2647 | benign | -0.215 | Destabilizing | 0.447 | N | 0.495 | neutral | None | None | None | None | N |
D/R | 0.4808 | ambiguous | 0.3903 | ambiguous | 0.314 | Stabilizing | 0.85 | D | 0.601 | neutral | None | None | None | None | N |
D/S | 0.1517 | likely_benign | 0.1328 | benign | -0.467 | Destabilizing | 0.25 | N | 0.463 | neutral | None | None | None | None | N |
D/T | 0.2639 | likely_benign | 0.2238 | benign | -0.225 | Destabilizing | 0.021 | N | 0.391 | neutral | None | None | None | None | N |
D/V | 0.2754 | likely_benign | 0.2286 | benign | 0.225 | Stabilizing | 0.549 | D | 0.51 | neutral | N | 0.481900005 | None | None | N |
D/W | 0.9324 | likely_pathogenic | 0.9051 | pathogenic | 0.193 | Stabilizing | 0.992 | D | 0.647 | neutral | None | None | None | None | N |
D/Y | 0.3497 | ambiguous | 0.2921 | benign | 0.27 | Stabilizing | 0.963 | D | 0.603 | neutral | N | 0.51574322 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.