Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21887 | 65884;65885;65886 | chr2:178583144;178583143;178583142 | chr2:179447871;179447870;179447869 |
N2AB | 20246 | 60961;60962;60963 | chr2:178583144;178583143;178583142 | chr2:179447871;179447870;179447869 |
N2A | 19319 | 58180;58181;58182 | chr2:178583144;178583143;178583142 | chr2:179447871;179447870;179447869 |
N2B | 12822 | 38689;38690;38691 | chr2:178583144;178583143;178583142 | chr2:179447871;179447870;179447869 |
Novex-1 | 12947 | 39064;39065;39066 | chr2:178583144;178583143;178583142 | chr2:179447871;179447870;179447869 |
Novex-2 | 13014 | 39265;39266;39267 | chr2:178583144;178583143;178583142 | chr2:179447871;179447870;179447869 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.767 | N | 0.25 | 0.244 | 0.556581311739 | gnomAD-4.0.0 | 3.18865E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72659E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8123 | likely_pathogenic | 0.7654 | pathogenic | -1.542 | Destabilizing | 0.998 | D | 0.594 | neutral | N | 0.486546181 | None | None | N |
V/C | 0.9582 | likely_pathogenic | 0.9455 | pathogenic | -0.717 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
V/D | 0.9972 | likely_pathogenic | 0.9963 | pathogenic | -1.406 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.60364195 | None | None | N |
V/E | 0.9914 | likely_pathogenic | 0.9898 | pathogenic | -1.406 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/F | 0.7385 | likely_pathogenic | 0.6541 | pathogenic | -1.259 | Destabilizing | 0.999 | D | 0.829 | deleterious | D | 0.533185338 | None | None | N |
V/G | 0.942 | likely_pathogenic | 0.9235 | pathogenic | -1.865 | Destabilizing | 1.0 | D | 0.85 | deleterious | D | 0.571371064 | None | None | N |
V/H | 0.9957 | likely_pathogenic | 0.9941 | pathogenic | -1.484 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
V/I | 0.0978 | likely_benign | 0.0937 | benign | -0.746 | Destabilizing | 0.767 | D | 0.25 | neutral | N | 0.505129155 | None | None | N |
V/K | 0.9933 | likely_pathogenic | 0.9917 | pathogenic | -1.197 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/L | 0.6045 | likely_pathogenic | 0.5321 | ambiguous | -0.746 | Destabilizing | 0.981 | D | 0.61 | neutral | D | 0.57612662 | None | None | N |
V/M | 0.6435 | likely_pathogenic | 0.5747 | pathogenic | -0.419 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
V/N | 0.9903 | likely_pathogenic | 0.9869 | pathogenic | -0.884 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/P | 0.9882 | likely_pathogenic | 0.9861 | pathogenic | -0.978 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
V/Q | 0.9889 | likely_pathogenic | 0.9862 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/R | 0.9852 | likely_pathogenic | 0.9822 | pathogenic | -0.692 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/S | 0.9519 | likely_pathogenic | 0.9352 | pathogenic | -1.362 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/T | 0.8879 | likely_pathogenic | 0.8608 | pathogenic | -1.257 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/W | 0.995 | likely_pathogenic | 0.9925 | pathogenic | -1.482 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/Y | 0.9711 | likely_pathogenic | 0.9593 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.