Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2189 | 6790;6791;6792 | chr2:178775146;178775145;178775144 | chr2:179639873;179639872;179639871 |
N2AB | 2189 | 6790;6791;6792 | chr2:178775146;178775145;178775144 | chr2:179639873;179639872;179639871 |
N2A | 2189 | 6790;6791;6792 | chr2:178775146;178775145;178775144 | chr2:179639873;179639872;179639871 |
N2B | 2143 | 6652;6653;6654 | chr2:178775146;178775145;178775144 | chr2:179639873;179639872;179639871 |
Novex-1 | 2143 | 6652;6653;6654 | chr2:178775146;178775145;178775144 | chr2:179639873;179639872;179639871 |
Novex-2 | 2143 | 6652;6653;6654 | chr2:178775146;178775145;178775144 | chr2:179639873;179639872;179639871 |
Novex-3 | 2189 | 6790;6791;6792 | chr2:178775146;178775145;178775144 | chr2:179639873;179639872;179639871 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs1252868552 | -0.573 | 1.0 | N | 0.791 | 0.55 | 0.355034743287 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5344 | ambiguous | 0.5765 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.76 | deleterious | N | 0.341796872 | None | None | N |
D/C | 0.9299 | likely_pathogenic | 0.9423 | pathogenic | 0.019 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
D/E | 0.3925 | ambiguous | 0.4306 | ambiguous | -0.567 | Destabilizing | 0.999 | D | 0.443 | neutral | N | 0.340350123 | None | None | N |
D/F | 0.8949 | likely_pathogenic | 0.9116 | pathogenic | -0.389 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
D/G | 0.4459 | ambiguous | 0.4957 | ambiguous | -0.633 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | N | 0.319875835 | None | None | N |
D/H | 0.7691 | likely_pathogenic | 0.8059 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.361804171 | None | None | N |
D/I | 0.8848 | likely_pathogenic | 0.9061 | pathogenic | 0.234 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
D/K | 0.8881 | likely_pathogenic | 0.9138 | pathogenic | -0.008 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
D/L | 0.8533 | likely_pathogenic | 0.8759 | pathogenic | 0.234 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
D/M | 0.908 | likely_pathogenic | 0.9246 | pathogenic | 0.55 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
D/N | 0.2677 | likely_benign | 0.3092 | benign | -0.258 | Destabilizing | 1.0 | D | 0.644 | neutral | N | 0.36664358 | None | None | N |
D/P | 0.9894 | likely_pathogenic | 0.9909 | pathogenic | 0.051 | Stabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
D/Q | 0.7883 | likely_pathogenic | 0.8234 | pathogenic | -0.218 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
D/R | 0.9192 | likely_pathogenic | 0.9364 | pathogenic | 0.072 | Stabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
D/S | 0.4078 | ambiguous | 0.4494 | ambiguous | -0.406 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
D/T | 0.7393 | likely_pathogenic | 0.7786 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
D/V | 0.703 | likely_pathogenic | 0.7445 | pathogenic | 0.051 | Stabilizing | 1.0 | D | 0.806 | deleterious | N | 0.471031223 | None | None | N |
D/W | 0.9819 | likely_pathogenic | 0.9848 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
D/Y | 0.5209 | ambiguous | 0.5702 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.377576283 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.