Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21908 | 65947;65948;65949 | chr2:178583081;178583080;178583079 | chr2:179447808;179447807;179447806 |
N2AB | 20267 | 61024;61025;61026 | chr2:178583081;178583080;178583079 | chr2:179447808;179447807;179447806 |
N2A | 19340 | 58243;58244;58245 | chr2:178583081;178583080;178583079 | chr2:179447808;179447807;179447806 |
N2B | 12843 | 38752;38753;38754 | chr2:178583081;178583080;178583079 | chr2:179447808;179447807;179447806 |
Novex-1 | 12968 | 39127;39128;39129 | chr2:178583081;178583080;178583079 | chr2:179447808;179447807;179447806 |
Novex-2 | 13035 | 39328;39329;39330 | chr2:178583081;178583080;178583079 | chr2:179447808;179447807;179447806 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.505 | N | 0.403 | 0.244 | 0.335164054921 | gnomAD-4.0.0 | 1.59688E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43744E-05 | 0 |
E/K | rs2154178693 | None | 0.013 | N | 0.265 | 0.198 | 0.250039746154 | gnomAD-4.0.0 | 4.79077E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.39772E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1238 | likely_benign | 0.1311 | benign | -0.013 | Destabilizing | 0.505 | D | 0.401 | neutral | N | 0.463731879 | None | None | N |
E/C | 0.8379 | likely_pathogenic | 0.8416 | pathogenic | -0.391 | Destabilizing | 0.991 | D | 0.604 | neutral | None | None | None | None | N |
E/D | 0.1086 | likely_benign | 0.1015 | benign | -0.571 | Destabilizing | 0.003 | N | 0.233 | neutral | N | 0.44402861 | None | None | N |
E/F | 0.7887 | likely_pathogenic | 0.789 | pathogenic | -0.142 | Destabilizing | 0.967 | D | 0.523 | neutral | None | None | None | None | N |
E/G | 0.1694 | likely_benign | 0.169 | benign | -0.08 | Destabilizing | 0.505 | D | 0.403 | neutral | N | 0.450781224 | None | None | N |
E/H | 0.451 | ambiguous | 0.4398 | ambiguous | 0.539 | Stabilizing | 0.906 | D | 0.39 | neutral | None | None | None | None | N |
E/I | 0.3867 | ambiguous | 0.3891 | ambiguous | 0.102 | Stabilizing | 0.906 | D | 0.537 | neutral | None | None | None | None | N |
E/K | 0.1341 | likely_benign | 0.1393 | benign | 0.194 | Stabilizing | 0.013 | N | 0.265 | neutral | N | 0.438777506 | None | None | N |
E/L | 0.4355 | ambiguous | 0.4341 | ambiguous | 0.102 | Stabilizing | 0.826 | D | 0.485 | neutral | None | None | None | None | N |
E/M | 0.5 | ambiguous | 0.4997 | ambiguous | -0.169 | Destabilizing | 0.973 | D | 0.496 | neutral | None | None | None | None | N |
E/N | 0.229 | likely_benign | 0.2291 | benign | 0.024 | Stabilizing | 0.404 | N | 0.377 | neutral | None | None | None | None | N |
E/P | 0.2874 | likely_benign | 0.2988 | benign | 0.079 | Stabilizing | 0.906 | D | 0.411 | neutral | None | None | None | None | N |
E/Q | 0.1543 | likely_benign | 0.1512 | benign | 0.005 | Stabilizing | 0.031 | N | 0.279 | neutral | N | 0.485531303 | None | None | N |
E/R | 0.2578 | likely_benign | 0.2628 | benign | 0.413 | Stabilizing | 0.404 | N | 0.377 | neutral | None | None | None | None | N |
E/S | 0.1752 | likely_benign | 0.1787 | benign | -0.104 | Destabilizing | 0.404 | N | 0.372 | neutral | None | None | None | None | N |
E/T | 0.2033 | likely_benign | 0.2096 | benign | -0.038 | Destabilizing | 0.826 | D | 0.385 | neutral | None | None | None | None | N |
E/V | 0.2243 | likely_benign | 0.2262 | benign | 0.079 | Stabilizing | 0.782 | D | 0.436 | neutral | N | 0.503463703 | None | None | N |
E/W | 0.9072 | likely_pathogenic | 0.9036 | pathogenic | -0.143 | Destabilizing | 0.991 | D | 0.621 | neutral | None | None | None | None | N |
E/Y | 0.6469 | likely_pathogenic | 0.6472 | pathogenic | 0.057 | Stabilizing | 0.967 | D | 0.478 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.