Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21919 | 65980;65981;65982 | chr2:178583048;178583047;178583046 | chr2:179447775;179447774;179447773 |
N2AB | 20278 | 61057;61058;61059 | chr2:178583048;178583047;178583046 | chr2:179447775;179447774;179447773 |
N2A | 19351 | 58276;58277;58278 | chr2:178583048;178583047;178583046 | chr2:179447775;179447774;179447773 |
N2B | 12854 | 38785;38786;38787 | chr2:178583048;178583047;178583046 | chr2:179447775;179447774;179447773 |
Novex-1 | 12979 | 39160;39161;39162 | chr2:178583048;178583047;178583046 | chr2:179447775;179447774;179447773 |
Novex-2 | 13046 | 39361;39362;39363 | chr2:178583048;178583047;178583046 | chr2:179447775;179447774;179447773 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs1403325884 | -1.82 | 0.512 | N | 0.699 | 0.182 | 0.428401797576 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.01E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4754 | ambiguous | 0.457 | ambiguous | -2.065 | Highly Destabilizing | 0.001 | N | 0.273 | neutral | None | None | None | None | N |
C/D | 0.9644 | likely_pathogenic | 0.9431 | pathogenic | -1.457 | Destabilizing | 0.223 | N | 0.72 | prob.delet. | None | None | None | None | N |
C/E | 0.9733 | likely_pathogenic | 0.958 | pathogenic | -1.271 | Destabilizing | 0.365 | N | 0.74 | deleterious | None | None | None | None | N |
C/F | 0.3023 | likely_benign | 0.2268 | benign | -1.443 | Destabilizing | 0.512 | D | 0.707 | prob.neutral | N | 0.408779886 | None | None | N |
C/G | 0.4328 | ambiguous | 0.3947 | ambiguous | -2.425 | Highly Destabilizing | 0.086 | N | 0.716 | prob.delet. | N | 0.372744515 | None | None | N |
C/H | 0.6956 | likely_pathogenic | 0.5804 | pathogenic | -2.618 | Highly Destabilizing | 0.001 | N | 0.583 | neutral | None | None | None | None | N |
C/I | 0.6916 | likely_pathogenic | 0.619 | pathogenic | -1.098 | Destabilizing | 0.223 | N | 0.699 | prob.neutral | None | None | None | None | N |
C/K | 0.9658 | likely_pathogenic | 0.9431 | pathogenic | -1.417 | Destabilizing | 0.365 | N | 0.733 | prob.delet. | None | None | None | None | N |
C/L | 0.564 | likely_pathogenic | 0.516 | ambiguous | -1.098 | Destabilizing | 0.001 | N | 0.459 | neutral | None | None | None | None | N |
C/M | 0.7302 | likely_pathogenic | 0.685 | pathogenic | 0.209 | Stabilizing | 0.83 | D | 0.722 | prob.delet. | None | None | None | None | N |
C/N | 0.8123 | likely_pathogenic | 0.7415 | pathogenic | -1.797 | Destabilizing | 0.008 | N | 0.603 | neutral | None | None | None | None | N |
C/P | 0.9881 | likely_pathogenic | 0.9834 | pathogenic | -1.397 | Destabilizing | 0.738 | D | 0.717 | prob.delet. | None | None | None | None | N |
C/Q | 0.8788 | likely_pathogenic | 0.8245 | pathogenic | -1.494 | Destabilizing | 0.738 | D | 0.722 | prob.delet. | None | None | None | None | N |
C/R | 0.8594 | likely_pathogenic | 0.7815 | pathogenic | -1.583 | Destabilizing | 0.302 | N | 0.688 | prob.neutral | N | 0.422402545 | None | None | N |
C/S | 0.4159 | ambiguous | 0.3683 | ambiguous | -2.203 | Highly Destabilizing | 0.086 | N | 0.655 | neutral | N | 0.384036157 | None | None | N |
C/T | 0.5673 | likely_pathogenic | 0.5084 | ambiguous | -1.822 | Destabilizing | 0.003 | N | 0.422 | neutral | None | None | None | None | N |
C/V | 0.5239 | ambiguous | 0.4743 | ambiguous | -1.397 | Destabilizing | 0.111 | N | 0.643 | neutral | None | None | None | None | N |
C/W | 0.7125 | likely_pathogenic | 0.6059 | pathogenic | -1.646 | Destabilizing | 0.988 | D | 0.694 | prob.neutral | N | 0.43440905 | None | None | N |
C/Y | 0.4322 | ambiguous | 0.3223 | benign | -1.566 | Destabilizing | 0.512 | D | 0.699 | prob.neutral | N | 0.419900957 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.