Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21921 | 65986;65987;65988 | chr2:178583042;178583041;178583040 | chr2:179447769;179447768;179447767 |
N2AB | 20280 | 61063;61064;61065 | chr2:178583042;178583041;178583040 | chr2:179447769;179447768;179447767 |
N2A | 19353 | 58282;58283;58284 | chr2:178583042;178583041;178583040 | chr2:179447769;179447768;179447767 |
N2B | 12856 | 38791;38792;38793 | chr2:178583042;178583041;178583040 | chr2:179447769;179447768;179447767 |
Novex-1 | 12981 | 39166;39167;39168 | chr2:178583042;178583041;178583040 | chr2:179447769;179447768;179447767 |
Novex-2 | 13048 | 39367;39368;39369 | chr2:178583042;178583041;178583040 | chr2:179447769;179447768;179447767 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.997 | D | 0.845 | 0.855 | 0.85411213676 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7205 | likely_pathogenic | 0.7129 | pathogenic | -2.607 | Highly Destabilizing | 0.966 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/C | 0.8619 | likely_pathogenic | 0.859 | pathogenic | -2.09 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
L/D | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -3.339 | Highly Destabilizing | 0.999 | D | 0.897 | deleterious | None | None | None | None | N |
L/E | 0.9932 | likely_pathogenic | 0.9931 | pathogenic | -3.029 | Highly Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
L/F | 0.5421 | ambiguous | 0.5078 | ambiguous | -1.61 | Destabilizing | 0.993 | D | 0.783 | deleterious | N | 0.502935935 | None | None | N |
L/G | 0.973 | likely_pathogenic | 0.9722 | pathogenic | -3.222 | Highly Destabilizing | 0.998 | D | 0.876 | deleterious | None | None | None | None | N |
L/H | 0.986 | likely_pathogenic | 0.9841 | pathogenic | -2.934 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/I | 0.1476 | likely_benign | 0.1497 | benign | -0.77 | Destabilizing | 0.966 | D | 0.686 | prob.neutral | None | None | None | None | N |
L/K | 0.9859 | likely_pathogenic | 0.9865 | pathogenic | -2.041 | Highly Destabilizing | 0.998 | D | 0.854 | deleterious | None | None | None | None | N |
L/M | 0.1991 | likely_benign | 0.193 | benign | -0.941 | Destabilizing | 0.997 | D | 0.774 | deleterious | D | 0.526649277 | None | None | N |
L/N | 0.9938 | likely_pathogenic | 0.9943 | pathogenic | -2.681 | Highly Destabilizing | 0.999 | D | 0.897 | deleterious | None | None | None | None | N |
L/P | 0.9957 | likely_pathogenic | 0.9945 | pathogenic | -1.371 | Destabilizing | 0.999 | D | 0.892 | deleterious | None | None | None | None | N |
L/Q | 0.9685 | likely_pathogenic | 0.9674 | pathogenic | -2.369 | Highly Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
L/R | 0.9735 | likely_pathogenic | 0.9724 | pathogenic | -2.068 | Highly Destabilizing | 0.998 | D | 0.882 | deleterious | None | None | None | None | N |
L/S | 0.9752 | likely_pathogenic | 0.9723 | pathogenic | -3.309 | Highly Destabilizing | 0.997 | D | 0.845 | deleterious | D | 0.55104741 | None | None | N |
L/T | 0.8612 | likely_pathogenic | 0.853 | pathogenic | -2.826 | Highly Destabilizing | 0.995 | D | 0.802 | deleterious | None | None | None | None | N |
L/V | 0.1359 | likely_benign | 0.1358 | benign | -1.371 | Destabilizing | 0.117 | N | 0.452 | neutral | N | 0.516191571 | None | None | N |
L/W | 0.9463 | likely_pathogenic | 0.9262 | pathogenic | -2.053 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | D | 0.562403715 | None | None | N |
L/Y | 0.9485 | likely_pathogenic | 0.9426 | pathogenic | -1.778 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.