Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21929 | 66010;66011;66012 | chr2:178583018;178583017;178583016 | chr2:179447745;179447744;179447743 |
N2AB | 20288 | 61087;61088;61089 | chr2:178583018;178583017;178583016 | chr2:179447745;179447744;179447743 |
N2A | 19361 | 58306;58307;58308 | chr2:178583018;178583017;178583016 | chr2:179447745;179447744;179447743 |
N2B | 12864 | 38815;38816;38817 | chr2:178583018;178583017;178583016 | chr2:179447745;179447744;179447743 |
Novex-1 | 12989 | 39190;39191;39192 | chr2:178583018;178583017;178583016 | chr2:179447745;179447744;179447743 |
Novex-2 | 13056 | 39391;39392;39393 | chr2:178583018;178583017;178583016 | chr2:179447745;179447744;179447743 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1465791266 | 0.409 | 0.998 | N | 0.551 | 0.153 | 0.192905019026 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 6.52E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs1465791266 | 0.409 | 0.998 | N | 0.551 | 0.153 | 0.192905019026 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1465791266 | 0.409 | 0.998 | N | 0.551 | 0.153 | 0.192905019026 | gnomAD-4.0.0 | 5.17072E-06 | None | None | None | None | N | None | 6.79094E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2931 | likely_benign | 0.2914 | benign | 0.051 | Stabilizing | 0.994 | D | 0.497 | neutral | None | None | None | None | N |
K/C | 0.7109 | likely_pathogenic | 0.6732 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
K/D | 0.4991 | ambiguous | 0.4937 | ambiguous | -0.053 | Destabilizing | 0.999 | D | 0.558 | neutral | None | None | None | None | N |
K/E | 0.1813 | likely_benign | 0.1729 | benign | -0.069 | Destabilizing | 0.996 | D | 0.525 | neutral | N | 0.368450629 | None | None | N |
K/F | 0.8054 | likely_pathogenic | 0.7691 | pathogenic | -0.294 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/G | 0.382 | ambiguous | 0.3804 | ambiguous | -0.099 | Destabilizing | 0.997 | D | 0.503 | neutral | None | None | None | None | N |
K/H | 0.3297 | likely_benign | 0.3153 | benign | -0.367 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
K/I | 0.4141 | ambiguous | 0.3821 | ambiguous | 0.362 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
K/L | 0.4033 | ambiguous | 0.3693 | ambiguous | 0.362 | Stabilizing | 1.0 | D | 0.499 | neutral | None | None | None | None | N |
K/M | 0.2533 | likely_benign | 0.2324 | benign | 0.21 | Stabilizing | 1.0 | D | 0.605 | neutral | N | 0.502154194 | None | None | N |
K/N | 0.3515 | ambiguous | 0.3482 | ambiguous | 0.319 | Stabilizing | 0.999 | D | 0.612 | neutral | N | 0.438641433 | None | None | N |
K/P | 0.8004 | likely_pathogenic | 0.7826 | pathogenic | 0.284 | Stabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | N |
K/Q | 0.1336 | likely_benign | 0.1292 | benign | 0.129 | Stabilizing | 0.999 | D | 0.646 | neutral | N | 0.430003307 | None | None | N |
K/R | 0.0852 | likely_benign | 0.0829 | benign | 0.056 | Stabilizing | 0.998 | D | 0.551 | neutral | N | 0.439969585 | None | None | N |
K/S | 0.3398 | likely_benign | 0.3388 | benign | -0.108 | Destabilizing | 0.927 | D | 0.33 | neutral | None | None | None | None | N |
K/T | 0.1692 | likely_benign | 0.1665 | benign | 0.006 | Stabilizing | 0.992 | D | 0.549 | neutral | N | 0.434678408 | None | None | N |
K/V | 0.3689 | ambiguous | 0.3477 | ambiguous | 0.284 | Stabilizing | 1.0 | D | 0.581 | neutral | None | None | None | None | N |
K/W | 0.7924 | likely_pathogenic | 0.7489 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/Y | 0.7 | likely_pathogenic | 0.6614 | pathogenic | 0.012 | Stabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.