Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21934 | 66025;66026;66027 | chr2:178583003;178583002;178583001 | chr2:179447730;179447729;179447728 |
N2AB | 20293 | 61102;61103;61104 | chr2:178583003;178583002;178583001 | chr2:179447730;179447729;179447728 |
N2A | 19366 | 58321;58322;58323 | chr2:178583003;178583002;178583001 | chr2:179447730;179447729;179447728 |
N2B | 12869 | 38830;38831;38832 | chr2:178583003;178583002;178583001 | chr2:179447730;179447729;179447728 |
Novex-1 | 12994 | 39205;39206;39207 | chr2:178583003;178583002;178583001 | chr2:179447730;179447729;179447728 |
Novex-2 | 13061 | 39406;39407;39408 | chr2:178583003;178583002;178583001 | chr2:179447730;179447729;179447728 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.999 | D | 0.825 | 0.799 | 0.801429400344 | gnomAD-4.0.0 | 7.20203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.87513E-06 | 0 | 0 |
Y/D | rs786205385 | None | 0.967 | D | 0.867 | 0.797 | 0.901314349755 | gnomAD-4.0.0 | 3.28938E-06 | None | None | None | None | N | None | 0 | 2.37338E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.10617E-05 |
Y/H | None | None | 0.994 | D | 0.699 | 0.806 | 0.750646069438 | gnomAD-4.0.0 | 3.28938E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.9102E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9977 | likely_pathogenic | 0.9974 | pathogenic | -2.332 | Highly Destabilizing | 0.845 | D | 0.811 | deleterious | None | None | None | None | N |
Y/C | 0.9372 | likely_pathogenic | 0.9321 | pathogenic | -1.801 | Destabilizing | 0.999 | D | 0.825 | deleterious | D | 0.635314553 | None | None | N |
Y/D | 0.9986 | likely_pathogenic | 0.9982 | pathogenic | -3.079 | Highly Destabilizing | 0.967 | D | 0.867 | deleterious | D | 0.635314553 | None | None | N |
Y/E | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -2.832 | Highly Destabilizing | 0.975 | D | 0.82 | deleterious | None | None | None | None | N |
Y/F | 0.1739 | likely_benign | 0.163 | benign | -0.777 | Destabilizing | 0.944 | D | 0.677 | prob.neutral | D | 0.560195005 | None | None | N |
Y/G | 0.996 | likely_pathogenic | 0.9955 | pathogenic | -2.792 | Highly Destabilizing | 0.845 | D | 0.834 | deleterious | None | None | None | None | N |
Y/H | 0.9765 | likely_pathogenic | 0.9751 | pathogenic | -2.122 | Highly Destabilizing | 0.994 | D | 0.699 | prob.neutral | D | 0.618861223 | None | None | N |
Y/I | 0.9408 | likely_pathogenic | 0.9396 | pathogenic | -0.808 | Destabilizing | 0.987 | D | 0.769 | deleterious | None | None | None | None | N |
Y/K | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -1.891 | Destabilizing | 0.975 | D | 0.822 | deleterious | None | None | None | None | N |
Y/L | 0.9057 | likely_pathogenic | 0.9055 | pathogenic | -0.808 | Destabilizing | 0.916 | D | 0.749 | deleterious | None | None | None | None | N |
Y/M | 0.9804 | likely_pathogenic | 0.98 | pathogenic | -0.965 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
Y/N | 0.9912 | likely_pathogenic | 0.9908 | pathogenic | -2.818 | Highly Destabilizing | 0.967 | D | 0.843 | deleterious | D | 0.619063027 | None | None | N |
Y/P | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -1.332 | Destabilizing | 0.987 | D | 0.87 | deleterious | None | None | None | None | N |
Y/Q | 0.999 | likely_pathogenic | 0.999 | pathogenic | -2.388 | Highly Destabilizing | 0.975 | D | 0.773 | deleterious | None | None | None | None | N |
Y/R | 0.9954 | likely_pathogenic | 0.9952 | pathogenic | -2.119 | Highly Destabilizing | 0.975 | D | 0.856 | deleterious | None | None | None | None | N |
Y/S | 0.9941 | likely_pathogenic | 0.9935 | pathogenic | -3.135 | Highly Destabilizing | 0.204 | N | 0.695 | prob.neutral | D | 0.635314553 | None | None | N |
Y/T | 0.997 | likely_pathogenic | 0.9966 | pathogenic | -2.737 | Highly Destabilizing | 0.95 | D | 0.814 | deleterious | None | None | None | None | N |
Y/V | 0.9244 | likely_pathogenic | 0.9193 | pathogenic | -1.332 | Destabilizing | 0.975 | D | 0.755 | deleterious | None | None | None | None | N |
Y/W | 0.8326 | likely_pathogenic | 0.8047 | pathogenic | -0.168 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.