Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21939 | 66040;66041;66042 | chr2:178582988;178582987;178582986 | chr2:179447715;179447714;179447713 |
N2AB | 20298 | 61117;61118;61119 | chr2:178582988;178582987;178582986 | chr2:179447715;179447714;179447713 |
N2A | 19371 | 58336;58337;58338 | chr2:178582988;178582987;178582986 | chr2:179447715;179447714;179447713 |
N2B | 12874 | 38845;38846;38847 | chr2:178582988;178582987;178582986 | chr2:179447715;179447714;179447713 |
Novex-1 | 12999 | 39220;39221;39222 | chr2:178582988;178582987;178582986 | chr2:179447715;179447714;179447713 |
Novex-2 | 13066 | 39421;39422;39423 | chr2:178582988;178582987;178582986 | chr2:179447715;179447714;179447713 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.989 | N | 0.615 | 0.38 | 0.393623145366 | gnomAD-4.0.0 | 7.12946E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.26219E-07 | 0 | 0 |
E/Q | None | None | 0.998 | N | 0.645 | 0.226 | 0.496957384516 | gnomAD-4.0.0 | 7.12946E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.26219E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1542 | likely_benign | 0.1629 | benign | -0.233 | Destabilizing | 0.978 | D | 0.587 | neutral | N | 0.491596924 | None | None | N |
E/C | 0.8033 | likely_pathogenic | 0.805 | pathogenic | 0.423 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.2038 | likely_benign | 0.2351 | benign | -0.34 | Destabilizing | 0.217 | N | 0.229 | neutral | D | 0.523535984 | None | None | N |
E/F | 0.7759 | likely_pathogenic | 0.7803 | pathogenic | -0.615 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
E/G | 0.2324 | likely_benign | 0.2504 | benign | -0.407 | Destabilizing | 0.989 | D | 0.691 | prob.neutral | D | 0.529981954 | None | None | N |
E/H | 0.4253 | ambiguous | 0.4303 | ambiguous | -0.795 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/I | 0.3224 | likely_benign | 0.3142 | benign | 0.177 | Stabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
E/K | 0.129 | likely_benign | 0.1265 | benign | 0.522 | Stabilizing | 0.989 | D | 0.615 | neutral | N | 0.478358268 | None | None | N |
E/L | 0.4469 | ambiguous | 0.4425 | ambiguous | 0.177 | Stabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/M | 0.4264 | ambiguous | 0.4203 | ambiguous | 0.569 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/N | 0.2778 | likely_benign | 0.3055 | benign | 0.393 | Stabilizing | 0.992 | D | 0.661 | neutral | None | None | None | None | N |
E/P | 0.9848 | likely_pathogenic | 0.9867 | pathogenic | 0.06 | Stabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/Q | 0.1018 | likely_benign | 0.1008 | benign | 0.387 | Stabilizing | 0.998 | D | 0.645 | neutral | N | 0.508201172 | None | None | N |
E/R | 0.2408 | likely_benign | 0.234 | benign | 0.362 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/S | 0.17 | likely_benign | 0.1853 | benign | 0.244 | Stabilizing | 0.82 | D | 0.315 | neutral | None | None | None | None | N |
E/T | 0.1533 | likely_benign | 0.1555 | benign | 0.383 | Stabilizing | 0.983 | D | 0.653 | neutral | None | None | None | None | N |
E/V | 0.1822 | likely_benign | 0.172 | benign | 0.06 | Stabilizing | 0.998 | D | 0.716 | prob.delet. | N | 0.503699429 | None | None | N |
E/W | 0.9118 | likely_pathogenic | 0.9141 | pathogenic | -0.645 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/Y | 0.6808 | likely_pathogenic | 0.6889 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.