Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21941 | 66046;66047;66048 | chr2:178582982;178582981;178582980 | chr2:179447709;179447708;179447707 |
N2AB | 20300 | 61123;61124;61125 | chr2:178582982;178582981;178582980 | chr2:179447709;179447708;179447707 |
N2A | 19373 | 58342;58343;58344 | chr2:178582982;178582981;178582980 | chr2:179447709;179447708;179447707 |
N2B | 12876 | 38851;38852;38853 | chr2:178582982;178582981;178582980 | chr2:179447709;179447708;179447707 |
Novex-1 | 13001 | 39226;39227;39228 | chr2:178582982;178582981;178582980 | chr2:179447709;179447708;179447707 |
Novex-2 | 13068 | 39427;39428;39429 | chr2:178582982;178582981;178582980 | chr2:179447709;179447708;179447707 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | None | N | 0.109 | 0.122 | 0.332386209738 | gnomAD-4.0.0 | 7.13798E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.26911E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0544 | likely_benign | 0.0602 | benign | -0.258 | Destabilizing | None | N | 0.087 | neutral | N | 0.416832593 | None | None | I |
S/C | 0.1318 | likely_benign | 0.1211 | benign | -0.389 | Destabilizing | 0.356 | N | 0.273 | neutral | None | None | None | None | I |
S/D | 0.3272 | likely_benign | 0.3307 | benign | -0.127 | Destabilizing | 0.072 | N | 0.162 | neutral | None | None | None | None | I |
S/E | 0.3759 | ambiguous | 0.3748 | ambiguous | -0.239 | Destabilizing | 0.031 | N | 0.153 | neutral | None | None | None | None | I |
S/F | 0.1995 | likely_benign | 0.2126 | benign | -1.037 | Destabilizing | 0.12 | N | 0.345 | neutral | None | None | None | None | I |
S/G | 0.0927 | likely_benign | 0.097 | benign | -0.266 | Destabilizing | 0.016 | N | 0.19 | neutral | None | None | None | None | I |
S/H | 0.3057 | likely_benign | 0.2843 | benign | -0.619 | Destabilizing | 0.628 | D | 0.275 | neutral | None | None | None | None | I |
S/I | 0.1053 | likely_benign | 0.1108 | benign | -0.358 | Destabilizing | 0.001 | N | 0.135 | neutral | None | None | None | None | I |
S/K | 0.4897 | ambiguous | 0.4635 | ambiguous | -0.398 | Destabilizing | 0.031 | N | 0.155 | neutral | None | None | None | None | I |
S/L | 0.0835 | likely_benign | 0.0885 | benign | -0.358 | Destabilizing | None | N | 0.109 | neutral | N | 0.492042428 | None | None | I |
S/M | 0.1678 | likely_benign | 0.1803 | benign | -0.217 | Destabilizing | 0.214 | N | 0.26 | neutral | None | None | None | None | I |
S/N | 0.1273 | likely_benign | 0.127 | benign | -0.172 | Destabilizing | 0.136 | N | 0.181 | neutral | None | None | None | None | I |
S/P | 0.0967 | likely_benign | 0.0934 | benign | -0.305 | Destabilizing | None | N | 0.104 | neutral | N | 0.456044342 | None | None | I |
S/Q | 0.3499 | ambiguous | 0.3395 | benign | -0.397 | Destabilizing | 0.136 | N | 0.186 | neutral | None | None | None | None | I |
S/R | 0.4259 | ambiguous | 0.4062 | ambiguous | -0.191 | Destabilizing | 0.072 | N | 0.289 | neutral | None | None | None | None | I |
S/T | 0.0786 | likely_benign | 0.0796 | benign | -0.289 | Destabilizing | 0.012 | N | 0.185 | neutral | N | 0.47553418 | None | None | I |
S/V | 0.1148 | likely_benign | 0.1235 | benign | -0.305 | Destabilizing | 0.007 | N | 0.291 | neutral | None | None | None | None | I |
S/W | 0.3988 | ambiguous | 0.3863 | ambiguous | -1.121 | Destabilizing | 0.864 | D | 0.281 | neutral | None | None | None | None | I |
S/Y | 0.2153 | likely_benign | 0.2184 | benign | -0.818 | Destabilizing | 0.356 | N | 0.333 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.