Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21944 | 66055;66056;66057 | chr2:178582973;178582972;178582971 | chr2:179447700;179447699;179447698 |
N2AB | 20303 | 61132;61133;61134 | chr2:178582973;178582972;178582971 | chr2:179447700;179447699;179447698 |
N2A | 19376 | 58351;58352;58353 | chr2:178582973;178582972;178582971 | chr2:179447700;179447699;179447698 |
N2B | 12879 | 38860;38861;38862 | chr2:178582973;178582972;178582971 | chr2:179447700;179447699;179447698 |
Novex-1 | 13004 | 39235;39236;39237 | chr2:178582973;178582972;178582971 | chr2:179447700;179447699;179447698 |
Novex-2 | 13071 | 39436;39437;39438 | chr2:178582973;178582972;178582971 | chr2:179447700;179447699;179447698 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.997 | D | 0.625 | 0.423 | 0.495573750707 | gnomAD-4.0.0 | 1.76804E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.16274E-06 | 0 | 0 |
S/Y | None | None | 0.99 | D | 0.713 | 0.435 | 0.622510390952 | gnomAD-4.0.0 | 1.76804E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.75371E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0962 | likely_benign | 0.1043 | benign | -0.305 | Destabilizing | 0.656 | D | 0.459 | neutral | N | 0.49734946 | None | None | N |
S/C | 0.0917 | likely_benign | 0.0874 | benign | -0.224 | Destabilizing | 0.997 | D | 0.625 | neutral | D | 0.527731082 | None | None | N |
S/D | 0.5063 | ambiguous | 0.5135 | ambiguous | -0.111 | Destabilizing | 0.926 | D | 0.47 | neutral | None | None | None | None | N |
S/E | 0.4412 | ambiguous | 0.4307 | ambiguous | -0.226 | Destabilizing | 0.86 | D | 0.487 | neutral | None | None | None | None | N |
S/F | 0.1786 | likely_benign | 0.1889 | benign | -1.016 | Destabilizing | 0.97 | D | 0.709 | prob.delet. | D | 0.525037494 | None | None | N |
S/G | 0.1315 | likely_benign | 0.143 | benign | -0.367 | Destabilizing | 0.86 | D | 0.458 | neutral | None | None | None | None | N |
S/H | 0.2876 | likely_benign | 0.2522 | benign | -0.89 | Destabilizing | 0.998 | D | 0.606 | neutral | None | None | None | None | N |
S/I | 0.1326 | likely_benign | 0.1504 | benign | -0.271 | Destabilizing | 0.754 | D | 0.621 | neutral | None | None | None | None | N |
S/K | 0.4518 | ambiguous | 0.4088 | ambiguous | -0.436 | Destabilizing | 0.86 | D | 0.479 | neutral | None | None | None | None | N |
S/L | 0.1057 | likely_benign | 0.1149 | benign | -0.271 | Destabilizing | 0.754 | D | 0.629 | neutral | None | None | None | None | N |
S/M | 0.1574 | likely_benign | 0.1675 | benign | 0.038 | Stabilizing | 0.994 | D | 0.603 | neutral | None | None | None | None | N |
S/N | 0.1362 | likely_benign | 0.1433 | benign | -0.135 | Destabilizing | 0.978 | D | 0.499 | neutral | None | None | None | None | N |
S/P | 0.8264 | likely_pathogenic | 0.84 | pathogenic | -0.257 | Destabilizing | 0.014 | N | 0.363 | neutral | N | 0.487013137 | None | None | N |
S/Q | 0.3484 | ambiguous | 0.3152 | benign | -0.441 | Destabilizing | 0.978 | D | 0.493 | neutral | None | None | None | None | N |
S/R | 0.4029 | ambiguous | 0.3661 | ambiguous | -0.189 | Destabilizing | 0.978 | D | 0.587 | neutral | None | None | None | None | N |
S/T | 0.0662 | likely_benign | 0.0763 | benign | -0.237 | Destabilizing | 0.822 | D | 0.459 | neutral | N | 0.45954322 | None | None | N |
S/V | 0.1464 | likely_benign | 0.1615 | benign | -0.257 | Destabilizing | 0.076 | N | 0.477 | neutral | None | None | None | None | N |
S/W | 0.353 | ambiguous | 0.3262 | benign | -1.044 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
S/Y | 0.1994 | likely_benign | 0.1947 | benign | -0.756 | Destabilizing | 0.99 | D | 0.713 | prob.delet. | D | 0.536985284 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.