Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21946 | 66061;66062;66063 | chr2:178582967;178582966;178582965 | chr2:179447694;179447693;179447692 |
N2AB | 20305 | 61138;61139;61140 | chr2:178582967;178582966;178582965 | chr2:179447694;179447693;179447692 |
N2A | 19378 | 58357;58358;58359 | chr2:178582967;178582966;178582965 | chr2:179447694;179447693;179447692 |
N2B | 12881 | 38866;38867;38868 | chr2:178582967;178582966;178582965 | chr2:179447694;179447693;179447692 |
Novex-1 | 13006 | 39241;39242;39243 | chr2:178582967;178582966;178582965 | chr2:179447694;179447693;179447692 |
Novex-2 | 13073 | 39442;39443;39444 | chr2:178582967;178582966;178582965 | chr2:179447694;179447693;179447692 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.873 | N | 0.571 | 0.424 | 0.347879110917 | gnomAD-4.0.0 | 1.76504E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.87555E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.082 | likely_benign | 0.0848 | benign | -0.299 | Destabilizing | 0.166 | N | 0.336 | neutral | N | 0.519687602 | None | None | N |
S/C | 0.1332 | likely_benign | 0.1126 | benign | -0.236 | Destabilizing | 0.991 | D | 0.507 | neutral | None | None | None | None | N |
S/D | 0.4305 | ambiguous | 0.428 | ambiguous | 0.038 | Stabilizing | 0.39 | N | 0.385 | neutral | None | None | None | None | N |
S/E | 0.413 | ambiguous | 0.4185 | ambiguous | -0.074 | Destabilizing | 0.017 | N | 0.177 | neutral | None | None | None | None | N |
S/F | 0.1872 | likely_benign | 0.1644 | benign | -0.997 | Destabilizing | 0.004 | N | 0.425 | neutral | None | None | None | None | N |
S/G | 0.1357 | likely_benign | 0.1359 | benign | -0.365 | Destabilizing | 0.345 | N | 0.388 | neutral | None | None | None | None | N |
S/H | 0.3408 | ambiguous | 0.2864 | benign | -0.901 | Destabilizing | 0.818 | D | 0.527 | neutral | None | None | None | None | N |
S/I | 0.166 | likely_benign | 0.1617 | benign | -0.257 | Destabilizing | 0.561 | D | 0.555 | neutral | None | None | None | None | N |
S/K | 0.5892 | likely_pathogenic | 0.5599 | ambiguous | -0.397 | Destabilizing | 0.004 | N | 0.188 | neutral | None | None | None | None | N |
S/L | 0.1123 | likely_benign | 0.1066 | benign | -0.257 | Destabilizing | 0.166 | N | 0.452 | neutral | D | 0.537620002 | None | None | N |
S/M | 0.1494 | likely_benign | 0.1429 | benign | 0.029 | Stabilizing | 0.965 | D | 0.523 | neutral | None | None | None | None | N |
S/N | 0.1436 | likely_benign | 0.1382 | benign | -0.109 | Destabilizing | 0.561 | D | 0.377 | neutral | None | None | None | None | N |
S/P | 0.7837 | likely_pathogenic | 0.7788 | pathogenic | -0.245 | Destabilizing | 0.873 | D | 0.571 | neutral | N | 0.498204859 | None | None | N |
S/Q | 0.4157 | ambiguous | 0.3798 | ambiguous | -0.402 | Destabilizing | 0.561 | D | 0.429 | neutral | None | None | None | None | N |
S/R | 0.5711 | likely_pathogenic | 0.5445 | ambiguous | -0.186 | Destabilizing | 0.39 | N | 0.518 | neutral | None | None | None | None | N |
S/T | 0.0636 | likely_benign | 0.0659 | benign | -0.224 | Destabilizing | 0.013 | N | 0.151 | neutral | N | 0.449227439 | None | None | N |
S/V | 0.159 | likely_benign | 0.1541 | benign | -0.245 | Destabilizing | 0.39 | N | 0.502 | neutral | None | None | None | None | N |
S/W | 0.394 | ambiguous | 0.3314 | benign | -1.019 | Destabilizing | 0.991 | D | 0.53 | neutral | None | None | None | None | N |
S/Y | 0.186 | likely_benign | 0.1532 | benign | -0.729 | Destabilizing | 0.007 | N | 0.332 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.