Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21947 | 66064;66065;66066 | chr2:178582964;178582963;178582962 | chr2:179447691;179447690;179447689 |
N2AB | 20306 | 61141;61142;61143 | chr2:178582964;178582963;178582962 | chr2:179447691;179447690;179447689 |
N2A | 19379 | 58360;58361;58362 | chr2:178582964;178582963;178582962 | chr2:179447691;179447690;179447689 |
N2B | 12882 | 38869;38870;38871 | chr2:178582964;178582963;178582962 | chr2:179447691;179447690;179447689 |
Novex-1 | 13007 | 39244;39245;39246 | chr2:178582964;178582963;178582962 | chr2:179447691;179447690;179447689 |
Novex-2 | 13074 | 39445;39446;39447 | chr2:178582964;178582963;178582962 | chr2:179447691;179447690;179447689 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | rs1434065340 | -0.845 | 0.983 | D | 0.773 | 0.69 | 0.553872852973 | gnomAD-4.0.0 | 1.82037E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.37701E-05 |
A/V | rs2154178631 | None | 0.892 | N | 0.652 | 0.365 | 0.473695954338 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94175E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.556 | ambiguous | 0.4773 | ambiguous | -0.791 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
A/D | 0.6962 | likely_pathogenic | 0.6498 | pathogenic | -0.218 | Destabilizing | 0.935 | D | 0.76 | deleterious | N | 0.499547985 | None | None | N |
A/E | 0.5689 | likely_pathogenic | 0.5092 | ambiguous | -0.351 | Destabilizing | 0.253 | N | 0.458 | neutral | None | None | None | None | N |
A/F | 0.6065 | likely_pathogenic | 0.5692 | pathogenic | -0.835 | Destabilizing | 0.987 | D | 0.819 | deleterious | None | None | None | None | N |
A/G | 0.2158 | likely_benign | 0.2017 | benign | -0.404 | Destabilizing | 0.805 | D | 0.585 | neutral | D | 0.536582639 | None | None | N |
A/H | 0.7784 | likely_pathogenic | 0.7134 | pathogenic | -0.468 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
A/I | 0.466 | ambiguous | 0.4074 | ambiguous | -0.268 | Destabilizing | 0.987 | D | 0.775 | deleterious | None | None | None | None | N |
A/K | 0.7944 | likely_pathogenic | 0.737 | pathogenic | -0.596 | Destabilizing | 0.916 | D | 0.722 | prob.delet. | None | None | None | None | N |
A/L | 0.4133 | ambiguous | 0.3694 | ambiguous | -0.268 | Destabilizing | 0.916 | D | 0.706 | prob.neutral | None | None | None | None | N |
A/M | 0.3798 | ambiguous | 0.3256 | benign | -0.335 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
A/N | 0.6119 | likely_pathogenic | 0.5598 | ambiguous | -0.294 | Destabilizing | 0.975 | D | 0.788 | deleterious | None | None | None | None | N |
A/P | 0.992 | likely_pathogenic | 0.9903 | pathogenic | -0.247 | Destabilizing | 0.983 | D | 0.773 | deleterious | D | 0.534795443 | None | None | N |
A/Q | 0.586 | likely_pathogenic | 0.5064 | ambiguous | -0.528 | Destabilizing | 0.975 | D | 0.774 | deleterious | None | None | None | None | N |
A/R | 0.7621 | likely_pathogenic | 0.6943 | pathogenic | -0.203 | Destabilizing | 0.975 | D | 0.773 | deleterious | None | None | None | None | N |
A/S | 0.1425 | likely_benign | 0.1355 | benign | -0.569 | Destabilizing | 0.099 | N | 0.405 | neutral | N | 0.496522741 | None | None | N |
A/T | 0.1322 | likely_benign | 0.1201 | benign | -0.608 | Destabilizing | 0.805 | D | 0.639 | neutral | N | 0.508355888 | None | None | N |
A/V | 0.2136 | likely_benign | 0.1852 | benign | -0.247 | Destabilizing | 0.892 | D | 0.652 | neutral | N | 0.516148652 | None | None | N |
A/W | 0.948 | likely_pathogenic | 0.926 | pathogenic | -0.999 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
A/Y | 0.7724 | likely_pathogenic | 0.7191 | pathogenic | -0.63 | Destabilizing | 0.996 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.