Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21948 | 66067;66068;66069 | chr2:178582961;178582960;178582959 | chr2:179447688;179447687;179447686 |
N2AB | 20307 | 61144;61145;61146 | chr2:178582961;178582960;178582959 | chr2:179447688;179447687;179447686 |
N2A | 19380 | 58363;58364;58365 | chr2:178582961;178582960;178582959 | chr2:179447688;179447687;179447686 |
N2B | 12883 | 38872;38873;38874 | chr2:178582961;178582960;178582959 | chr2:179447688;179447687;179447686 |
Novex-1 | 13008 | 39247;39248;39249 | chr2:178582961;178582960;178582959 | chr2:179447688;179447687;179447686 |
Novex-2 | 13075 | 39448;39449;39450 | chr2:178582961;178582960;178582959 | chr2:179447688;179447687;179447686 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.835 | N | 0.58 | 0.259 | 0.317378411342 | gnomAD-4.0.0 | 7.21209E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.31699E-07 | 0 | 0 |
T/S | None | None | 0.489 | N | 0.335 | 0.212 | 0.212008924253 | gnomAD-4.0.0 | 7.21209E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.31699E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0716 | likely_benign | 0.0713 | benign | -0.573 | Destabilizing | 0.835 | D | 0.58 | neutral | N | 0.498157537 | None | None | N |
T/C | 0.3196 | likely_benign | 0.2952 | benign | -0.305 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/D | 0.3578 | ambiguous | 0.3467 | ambiguous | 0.004 | Stabilizing | 0.942 | D | 0.657 | neutral | None | None | None | None | N |
T/E | 0.3271 | likely_benign | 0.3124 | benign | -0.057 | Destabilizing | 0.97 | D | 0.665 | neutral | None | None | None | None | N |
T/F | 0.2314 | likely_benign | 0.24 | benign | -0.954 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
T/G | 0.2168 | likely_benign | 0.209 | benign | -0.743 | Destabilizing | 0.97 | D | 0.753 | deleterious | None | None | None | None | N |
T/H | 0.2132 | likely_benign | 0.1974 | benign | -1.081 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
T/I | 0.1347 | likely_benign | 0.1345 | benign | -0.236 | Destabilizing | 0.994 | D | 0.745 | deleterious | D | 0.532867543 | None | None | N |
T/K | 0.1976 | likely_benign | 0.1894 | benign | -0.516 | Destabilizing | 0.97 | D | 0.666 | neutral | None | None | None | None | N |
T/L | 0.11 | likely_benign | 0.1091 | benign | -0.236 | Destabilizing | 0.985 | D | 0.669 | neutral | None | None | None | None | N |
T/M | 0.0949 | likely_benign | 0.0961 | benign | 0.092 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/N | 0.1021 | likely_benign | 0.0944 | benign | -0.315 | Destabilizing | 0.248 | N | 0.288 | neutral | N | 0.485748387 | None | None | N |
T/P | 0.2016 | likely_benign | 0.2003 | benign | -0.318 | Destabilizing | 0.994 | D | 0.745 | deleterious | N | 0.518130164 | None | None | N |
T/Q | 0.2034 | likely_benign | 0.1927 | benign | -0.57 | Destabilizing | 0.996 | D | 0.749 | deleterious | None | None | None | None | N |
T/R | 0.1788 | likely_benign | 0.1695 | benign | -0.222 | Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/S | 0.092 | likely_benign | 0.0898 | benign | -0.556 | Destabilizing | 0.489 | N | 0.335 | neutral | N | 0.45232646 | None | None | N |
T/V | 0.0977 | likely_benign | 0.0995 | benign | -0.318 | Destabilizing | 0.985 | D | 0.568 | neutral | None | None | None | None | N |
T/W | 0.6142 | likely_pathogenic | 0.616 | pathogenic | -0.903 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
T/Y | 0.2682 | likely_benign | 0.2662 | benign | -0.65 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.