Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21949 | 66070;66071;66072 | chr2:178582958;178582957;178582956 | chr2:179447685;179447684;179447683 |
N2AB | 20308 | 61147;61148;61149 | chr2:178582958;178582957;178582956 | chr2:179447685;179447684;179447683 |
N2A | 19381 | 58366;58367;58368 | chr2:178582958;178582957;178582956 | chr2:179447685;179447684;179447683 |
N2B | 12884 | 38875;38876;38877 | chr2:178582958;178582957;178582956 | chr2:179447685;179447684;179447683 |
Novex-1 | 13009 | 39250;39251;39252 | chr2:178582958;178582957;178582956 | chr2:179447685;179447684;179447683 |
Novex-2 | 13076 | 39451;39452;39453 | chr2:178582958;178582957;178582956 | chr2:179447685;179447684;179447683 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs779413774 | -1.383 | 0.333 | N | 0.177 | 0.085 | 0.418718287753 | gnomAD-2.1.1 | 4.72E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.9E-06 | 0 |
I/V | rs779413774 | -1.383 | 0.333 | N | 0.177 | 0.085 | 0.418718287753 | gnomAD-4.0.0 | 3.61153E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.41457E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8992 | likely_pathogenic | 0.8654 | pathogenic | -2.687 | Highly Destabilizing | 0.992 | D | 0.595 | neutral | None | None | None | None | N |
I/C | 0.9168 | likely_pathogenic | 0.889 | pathogenic | -2.316 | Highly Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
I/D | 0.999 | likely_pathogenic | 0.9985 | pathogenic | -2.539 | Highly Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
I/E | 0.9957 | likely_pathogenic | 0.9944 | pathogenic | -2.314 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
I/F | 0.5289 | ambiguous | 0.5095 | ambiguous | -1.656 | Destabilizing | 0.998 | D | 0.643 | neutral | N | 0.485575028 | None | None | N |
I/G | 0.9878 | likely_pathogenic | 0.9826 | pathogenic | -3.255 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
I/H | 0.9926 | likely_pathogenic | 0.9884 | pathogenic | -2.607 | Highly Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
I/K | 0.9887 | likely_pathogenic | 0.9832 | pathogenic | -1.978 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
I/L | 0.2745 | likely_benign | 0.277 | benign | -1.044 | Destabilizing | 0.889 | D | 0.427 | neutral | N | 0.48872719 | None | None | N |
I/M | 0.2827 | likely_benign | 0.2604 | benign | -1.156 | Destabilizing | 0.998 | D | 0.643 | neutral | N | 0.517514089 | None | None | N |
I/N | 0.9842 | likely_pathogenic | 0.9752 | pathogenic | -2.267 | Highly Destabilizing | 0.999 | D | 0.819 | deleterious | N | 0.494090255 | None | None | N |
I/P | 0.9963 | likely_pathogenic | 0.9945 | pathogenic | -1.572 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
I/Q | 0.9882 | likely_pathogenic | 0.9824 | pathogenic | -2.128 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
I/R | 0.9805 | likely_pathogenic | 0.9706 | pathogenic | -1.727 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
I/S | 0.9704 | likely_pathogenic | 0.9561 | pathogenic | -3.106 | Highly Destabilizing | 0.998 | D | 0.739 | prob.delet. | N | 0.497234817 | None | None | N |
I/T | 0.9606 | likely_pathogenic | 0.9447 | pathogenic | -2.716 | Highly Destabilizing | 0.989 | D | 0.695 | prob.neutral | N | 0.490692847 | None | None | N |
I/V | 0.1064 | likely_benign | 0.1056 | benign | -1.572 | Destabilizing | 0.333 | N | 0.177 | neutral | N | 0.451729027 | None | None | N |
I/W | 0.9846 | likely_pathogenic | 0.9795 | pathogenic | -1.91 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
I/Y | 0.9492 | likely_pathogenic | 0.9364 | pathogenic | -1.681 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.