Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21951 | 66076;66077;66078 | chr2:178582952;178582951;178582950 | chr2:179447679;179447678;179447677 |
N2AB | 20310 | 61153;61154;61155 | chr2:178582952;178582951;178582950 | chr2:179447679;179447678;179447677 |
N2A | 19383 | 58372;58373;58374 | chr2:178582952;178582951;178582950 | chr2:179447679;179447678;179447677 |
N2B | 12886 | 38881;38882;38883 | chr2:178582952;178582951;178582950 | chr2:179447679;179447678;179447677 |
Novex-1 | 13011 | 39256;39257;39258 | chr2:178582952;178582951;178582950 | chr2:179447679;179447678;179447677 |
Novex-2 | 13078 | 39457;39458;39459 | chr2:178582952;178582951;178582950 | chr2:179447679;179447678;179447677 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs2048118733 | None | 0.998 | N | 0.757 | 0.489 | 0.746961985857 | gnomAD-4.0.0 | 1.20037E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31256E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.967 | likely_pathogenic | 0.9532 | pathogenic | -2.63 | Highly Destabilizing | 0.992 | D | 0.699 | prob.neutral | None | None | None | None | N |
L/C | 0.9063 | likely_pathogenic | 0.8798 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -2.874 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/E | 0.997 | likely_pathogenic | 0.9957 | pathogenic | -2.569 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/F | 0.7737 | likely_pathogenic | 0.6939 | pathogenic | -1.616 | Destabilizing | 0.998 | D | 0.757 | deleterious | N | 0.512565542 | None | None | N |
L/G | 0.993 | likely_pathogenic | 0.9892 | pathogenic | -3.251 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
L/H | 0.9944 | likely_pathogenic | 0.9901 | pathogenic | -2.829 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | D | 0.525353879 | None | None | N |
L/I | 0.1305 | likely_benign | 0.1258 | benign | -0.796 | Destabilizing | 0.948 | D | 0.615 | neutral | N | 0.506462015 | None | None | N |
L/K | 0.9939 | likely_pathogenic | 0.9906 | pathogenic | -2.052 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/M | 0.3396 | likely_benign | 0.3029 | benign | -0.838 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
L/N | 0.9967 | likely_pathogenic | 0.9951 | pathogenic | -2.638 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/P | 0.9972 | likely_pathogenic | 0.9949 | pathogenic | -1.392 | Destabilizing | 0.999 | D | 0.856 | deleterious | D | 0.525353879 | None | None | N |
L/Q | 0.99 | likely_pathogenic | 0.9843 | pathogenic | -2.322 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
L/R | 0.9898 | likely_pathogenic | 0.9837 | pathogenic | -2.023 | Highly Destabilizing | 0.999 | D | 0.826 | deleterious | D | 0.525353879 | None | None | N |
L/S | 0.9965 | likely_pathogenic | 0.9943 | pathogenic | -3.356 | Highly Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
L/T | 0.964 | likely_pathogenic | 0.9483 | pathogenic | -2.875 | Highly Destabilizing | 0.992 | D | 0.747 | deleterious | None | None | None | None | N |
L/V | 0.1278 | likely_benign | 0.116 | benign | -1.392 | Destabilizing | 0.333 | N | 0.296 | neutral | N | 0.436193853 | None | None | N |
L/W | 0.9801 | likely_pathogenic | 0.9614 | pathogenic | -1.998 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
L/Y | 0.9783 | likely_pathogenic | 0.9613 | pathogenic | -1.709 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.