Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21952 | 66079;66080;66081 | chr2:178582949;178582948;178582947 | chr2:179447676;179447675;179447674 |
N2AB | 20311 | 61156;61157;61158 | chr2:178582949;178582948;178582947 | chr2:179447676;179447675;179447674 |
N2A | 19384 | 58375;58376;58377 | chr2:178582949;178582948;178582947 | chr2:179447676;179447675;179447674 |
N2B | 12887 | 38884;38885;38886 | chr2:178582949;178582948;178582947 | chr2:179447676;179447675;179447674 |
Novex-1 | 13012 | 39259;39260;39261 | chr2:178582949;178582948;178582947 | chr2:179447676;179447675;179447674 |
Novex-2 | 13079 | 39460;39461;39462 | chr2:178582949;178582948;178582947 | chr2:179447676;179447675;179447674 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2048118319 | None | 0.811 | N | 0.601 | 0.276 | 0.233785782151 | gnomAD-4.0.0 | 5.55821E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.77301E-05 | None | 0 | 0 | 3.27255E-06 | 0 | 0 |
K/I | rs371740766 | None | 0.968 | N | 0.74 | 0.443 | None | gnomAD-4.0.0 | 1.45816E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.87469E-06 | 0 | 0 |
K/R | None | None | 0.811 | N | 0.555 | 0.157 | 0.367042808489 | gnomAD-4.0.0 | 7.29079E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.37346E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6409 | likely_pathogenic | 0.5053 | ambiguous | -0.736 | Destabilizing | 0.919 | D | 0.599 | neutral | None | None | None | None | N |
K/C | 0.7727 | likely_pathogenic | 0.6592 | pathogenic | -0.799 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
K/D | 0.8683 | likely_pathogenic | 0.8009 | pathogenic | -0.026 | Destabilizing | 0.976 | D | 0.597 | neutral | None | None | None | None | N |
K/E | 0.4118 | ambiguous | 0.3224 | benign | 0.116 | Stabilizing | 0.811 | D | 0.601 | neutral | N | 0.475454035 | None | None | N |
K/F | 0.8959 | likely_pathogenic | 0.8335 | pathogenic | -0.319 | Destabilizing | 0.996 | D | 0.746 | deleterious | None | None | None | None | N |
K/G | 0.8699 | likely_pathogenic | 0.7982 | pathogenic | -1.125 | Destabilizing | 0.919 | D | 0.613 | neutral | None | None | None | None | N |
K/H | 0.3705 | ambiguous | 0.289 | benign | -1.342 | Destabilizing | 0.997 | D | 0.618 | neutral | None | None | None | None | N |
K/I | 0.4244 | ambiguous | 0.3377 | benign | 0.286 | Stabilizing | 0.968 | D | 0.74 | deleterious | N | 0.474590031 | None | None | N |
K/L | 0.4666 | ambiguous | 0.3356 | benign | 0.286 | Stabilizing | 0.919 | D | 0.62 | neutral | None | None | None | None | N |
K/M | 0.2938 | likely_benign | 0.2187 | benign | 0.082 | Stabilizing | 0.997 | D | 0.616 | neutral | None | None | None | None | N |
K/N | 0.6601 | likely_pathogenic | 0.5659 | pathogenic | -0.596 | Destabilizing | 0.968 | D | 0.547 | neutral | N | 0.460775371 | None | None | N |
K/P | 0.9906 | likely_pathogenic | 0.9814 | pathogenic | -0.025 | Destabilizing | 0.988 | D | 0.631 | neutral | None | None | None | None | N |
K/Q | 0.1855 | likely_benign | 0.1353 | benign | -0.613 | Destabilizing | 0.211 | N | 0.339 | neutral | N | 0.475280677 | None | None | N |
K/R | 0.1008 | likely_benign | 0.0982 | benign | -0.621 | Destabilizing | 0.811 | D | 0.555 | neutral | N | 0.472165801 | None | None | N |
K/S | 0.7095 | likely_pathogenic | 0.5864 | pathogenic | -1.337 | Destabilizing | 0.851 | D | 0.582 | neutral | None | None | None | None | N |
K/T | 0.2621 | likely_benign | 0.1882 | benign | -0.974 | Destabilizing | 0.103 | N | 0.398 | neutral | N | 0.445939205 | None | None | N |
K/V | 0.4063 | ambiguous | 0.3274 | benign | -0.025 | Destabilizing | 0.976 | D | 0.608 | neutral | None | None | None | None | N |
K/W | 0.8732 | likely_pathogenic | 0.8058 | pathogenic | -0.161 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
K/Y | 0.7933 | likely_pathogenic | 0.6988 | pathogenic | 0.127 | Stabilizing | 0.996 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.