Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21959 | 66100;66101;66102 | chr2:178582581;178582580;178582579 | chr2:179447308;179447307;179447306 |
N2AB | 20318 | 61177;61178;61179 | chr2:178582581;178582580;178582579 | chr2:179447308;179447307;179447306 |
N2A | 19391 | 58396;58397;58398 | chr2:178582581;178582580;178582579 | chr2:179447308;179447307;179447306 |
N2B | 12894 | 38905;38906;38907 | chr2:178582581;178582580;178582579 | chr2:179447308;179447307;179447306 |
Novex-1 | 13019 | 39280;39281;39282 | chr2:178582581;178582580;178582579 | chr2:179447308;179447307;179447306 |
Novex-2 | 13086 | 39481;39482;39483 | chr2:178582581;178582580;178582579 | chr2:179447308;179447307;179447306 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.869 | 0.469 | 0.657373984822 | gnomAD-4.0.0 | 6.87087E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02582E-07 | 0 | 0 |
P/R | None | None | 1.0 | N | 0.893 | 0.477 | 0.486851695374 | gnomAD-4.0.0 | 1.37417E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80516E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2058 | likely_benign | 0.1532 | benign | -1.565 | Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.501949124 | None | None | N |
P/C | 0.8044 | likely_pathogenic | 0.7039 | pathogenic | -0.987 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
P/D | 0.9552 | likely_pathogenic | 0.934 | pathogenic | -1.887 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
P/E | 0.7859 | likely_pathogenic | 0.6977 | pathogenic | -1.916 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
P/F | 0.8624 | likely_pathogenic | 0.7911 | pathogenic | -1.354 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
P/G | 0.8339 | likely_pathogenic | 0.7498 | pathogenic | -1.85 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
P/H | 0.6681 | likely_pathogenic | 0.5491 | ambiguous | -1.433 | Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.530484624 | None | None | N |
P/I | 0.646 | likely_pathogenic | 0.5216 | ambiguous | -0.879 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/K | 0.62 | likely_pathogenic | 0.4859 | ambiguous | -1.265 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
P/L | 0.4308 | ambiguous | 0.3116 | benign | -0.879 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.530231134 | None | None | N |
P/M | 0.6614 | likely_pathogenic | 0.5436 | ambiguous | -0.597 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
P/N | 0.8779 | likely_pathogenic | 0.8237 | pathogenic | -1.027 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/Q | 0.5142 | ambiguous | 0.3943 | ambiguous | -1.286 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
P/R | 0.5159 | ambiguous | 0.379 | ambiguous | -0.688 | Destabilizing | 1.0 | D | 0.893 | deleterious | N | 0.506086492 | None | None | N |
P/S | 0.5373 | ambiguous | 0.4062 | ambiguous | -1.441 | Destabilizing | 1.0 | D | 0.82 | deleterious | N | 0.482613412 | None | None | N |
P/T | 0.5247 | ambiguous | 0.3801 | ambiguous | -1.379 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.522976206 | None | None | N |
P/V | 0.5225 | ambiguous | 0.4021 | ambiguous | -1.075 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
P/W | 0.962 | likely_pathogenic | 0.9367 | pathogenic | -1.531 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
P/Y | 0.8804 | likely_pathogenic | 0.8109 | pathogenic | -1.262 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.