Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21960 | 66103;66104;66105 | chr2:178582578;178582577;178582576 | chr2:179447305;179447304;179447303 |
N2AB | 20319 | 61180;61181;61182 | chr2:178582578;178582577;178582576 | chr2:179447305;179447304;179447303 |
N2A | 19392 | 58399;58400;58401 | chr2:178582578;178582577;178582576 | chr2:179447305;179447304;179447303 |
N2B | 12895 | 38908;38909;38910 | chr2:178582578;178582577;178582576 | chr2:179447305;179447304;179447303 |
Novex-1 | 13020 | 39283;39284;39285 | chr2:178582578;178582577;178582576 | chr2:179447305;179447304;179447303 |
Novex-2 | 13087 | 39484;39485;39486 | chr2:178582578;178582577;178582576 | chr2:179447305;179447304;179447303 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.025 | D | 0.775 | 0.576 | 0.589785090976 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
P/T | None | None | 0.967 | D | 0.827 | 0.624 | 0.543299242062 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.6642 | likely_pathogenic | 0.5177 | ambiguous | -2.05 | Highly Destabilizing | 0.805 | D | 0.785 | deleterious | D | 0.527192255 | None | None | N |
P/C | 0.895 | likely_pathogenic | 0.8495 | pathogenic | -1.707 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
P/D | 0.9994 | likely_pathogenic | 0.9989 | pathogenic | -3.231 | Highly Destabilizing | 0.996 | D | 0.833 | deleterious | None | None | None | None | N |
P/E | 0.9975 | likely_pathogenic | 0.9959 | pathogenic | -2.949 | Highly Destabilizing | 0.987 | D | 0.839 | deleterious | None | None | None | None | N |
P/F | 0.999 | likely_pathogenic | 0.9979 | pathogenic | -1.017 | Destabilizing | 0.975 | D | 0.901 | deleterious | None | None | None | None | N |
P/G | 0.9915 | likely_pathogenic | 0.9843 | pathogenic | -2.62 | Highly Destabilizing | 0.987 | D | 0.858 | deleterious | None | None | None | None | N |
P/H | 0.9984 | likely_pathogenic | 0.9967 | pathogenic | -2.582 | Highly Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
P/I | 0.8447 | likely_pathogenic | 0.772 | pathogenic | -0.411 | Destabilizing | 0.845 | D | 0.883 | deleterious | None | None | None | None | N |
P/K | 0.9989 | likely_pathogenic | 0.9981 | pathogenic | -1.681 | Destabilizing | 0.987 | D | 0.825 | deleterious | None | None | None | None | N |
P/L | 0.9108 | likely_pathogenic | 0.8278 | pathogenic | -0.411 | Destabilizing | 0.025 | N | 0.775 | deleterious | D | 0.555892347 | None | None | N |
P/M | 0.9772 | likely_pathogenic | 0.9562 | pathogenic | -0.752 | Destabilizing | 0.993 | D | 0.883 | deleterious | None | None | None | None | N |
P/N | 0.9985 | likely_pathogenic | 0.9971 | pathogenic | -2.247 | Highly Destabilizing | 0.996 | D | 0.873 | deleterious | None | None | None | None | N |
P/Q | 0.996 | likely_pathogenic | 0.9924 | pathogenic | -1.954 | Destabilizing | 0.994 | D | 0.808 | deleterious | D | 0.569023079 | None | None | N |
P/R | 0.9968 | likely_pathogenic | 0.994 | pathogenic | -1.723 | Destabilizing | 0.983 | D | 0.873 | deleterious | D | 0.5685161 | None | None | N |
P/S | 0.9724 | likely_pathogenic | 0.9418 | pathogenic | -2.736 | Highly Destabilizing | 0.983 | D | 0.821 | deleterious | D | 0.557413284 | None | None | N |
P/T | 0.8846 | likely_pathogenic | 0.8039 | pathogenic | -2.312 | Highly Destabilizing | 0.967 | D | 0.827 | deleterious | D | 0.556652816 | None | None | N |
P/V | 0.4954 | ambiguous | 0.4257 | ambiguous | -0.937 | Destabilizing | 0.073 | N | 0.74 | deleterious | None | None | None | None | N |
P/W | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -1.693 | Destabilizing | 0.999 | D | 0.854 | deleterious | None | None | None | None | N |
P/Y | 0.9997 | likely_pathogenic | 0.9993 | pathogenic | -1.314 | Destabilizing | 0.987 | D | 0.91 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.