Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21965 | 66118;66119;66120 | chr2:178582563;178582562;178582561 | chr2:179447290;179447289;179447288 |
N2AB | 20324 | 61195;61196;61197 | chr2:178582563;178582562;178582561 | chr2:179447290;179447289;179447288 |
N2A | 19397 | 58414;58415;58416 | chr2:178582563;178582562;178582561 | chr2:179447290;179447289;179447288 |
N2B | 12900 | 38923;38924;38925 | chr2:178582563;178582562;178582561 | chr2:179447290;179447289;179447288 |
Novex-1 | 13025 | 39298;39299;39300 | chr2:178582563;178582562;178582561 | chr2:179447290;179447289;179447288 |
Novex-2 | 13092 | 39499;39500;39501 | chr2:178582563;178582562;178582561 | chr2:179447290;179447289;179447288 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.999 | N | 0.572 | 0.367 | 0.470072546239 | gnomAD-4.0.0 | 3.19797E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.77031E-05 | 0 | 0 | 0 | 0 |
I/T | rs1575938216 | None | 0.4 | N | 0.377 | 0.23 | 0.526943034955 | gnomAD-4.0.0 | 2.05676E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.98041E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8948 | likely_pathogenic | 0.8535 | pathogenic | -1.906 | Destabilizing | 0.469 | N | 0.327 | neutral | None | None | None | None | N |
I/C | 0.888 | likely_pathogenic | 0.8502 | pathogenic | -1.131 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
I/D | 0.9846 | likely_pathogenic | 0.9763 | pathogenic | -1.363 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
I/E | 0.9568 | likely_pathogenic | 0.9337 | pathogenic | -1.327 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
I/F | 0.3894 | ambiguous | 0.3546 | ambiguous | -1.332 | Destabilizing | 0.999 | D | 0.605 | neutral | N | 0.507416446 | None | None | N |
I/G | 0.9721 | likely_pathogenic | 0.9562 | pathogenic | -2.283 | Highly Destabilizing | 0.985 | D | 0.747 | deleterious | None | None | None | None | N |
I/H | 0.9492 | likely_pathogenic | 0.9239 | pathogenic | -1.541 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
I/K | 0.8971 | likely_pathogenic | 0.8373 | pathogenic | -1.313 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | N |
I/L | 0.2438 | likely_benign | 0.1988 | benign | -0.918 | Destabilizing | 0.953 | D | 0.445 | neutral | N | 0.487734607 | None | None | N |
I/M | 0.1919 | likely_benign | 0.1609 | benign | -0.677 | Destabilizing | 0.999 | D | 0.572 | neutral | N | 0.495869049 | None | None | N |
I/N | 0.8507 | likely_pathogenic | 0.7927 | pathogenic | -1.12 | Destabilizing | 0.997 | D | 0.798 | deleterious | N | 0.507985823 | None | None | N |
I/P | 0.9212 | likely_pathogenic | 0.8812 | pathogenic | -1.217 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
I/Q | 0.9185 | likely_pathogenic | 0.8782 | pathogenic | -1.253 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
I/R | 0.8841 | likely_pathogenic | 0.8225 | pathogenic | -0.765 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
I/S | 0.911 | likely_pathogenic | 0.8752 | pathogenic | -1.773 | Destabilizing | 0.961 | D | 0.661 | neutral | N | 0.489121099 | None | None | N |
I/T | 0.8621 | likely_pathogenic | 0.8159 | pathogenic | -1.608 | Destabilizing | 0.4 | N | 0.377 | neutral | N | 0.478018283 | None | None | N |
I/V | 0.1495 | likely_benign | 0.1381 | benign | -1.217 | Destabilizing | 0.899 | D | 0.442 | neutral | N | 0.418986598 | None | None | N |
I/W | 0.8916 | likely_pathogenic | 0.8669 | pathogenic | -1.44 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
I/Y | 0.8094 | likely_pathogenic | 0.7585 | pathogenic | -1.222 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.