Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2197 | 6814;6815;6816 | chr2:178775122;178775121;178775120 | chr2:179639849;179639848;179639847 |
N2AB | 2197 | 6814;6815;6816 | chr2:178775122;178775121;178775120 | chr2:179639849;179639848;179639847 |
N2A | 2197 | 6814;6815;6816 | chr2:178775122;178775121;178775120 | chr2:179639849;179639848;179639847 |
N2B | 2151 | 6676;6677;6678 | chr2:178775122;178775121;178775120 | chr2:179639849;179639848;179639847 |
Novex-1 | 2151 | 6676;6677;6678 | chr2:178775122;178775121;178775120 | chr2:179639849;179639848;179639847 |
Novex-2 | 2151 | 6676;6677;6678 | chr2:178775122;178775121;178775120 | chr2:179639849;179639848;179639847 |
Novex-3 | 2197 | 6814;6815;6816 | chr2:178775122;178775121;178775120 | chr2:179639849;179639848;179639847 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs139329751 | -0.752 | 0.999 | D | 0.527 | 0.476 | 0.494433119893 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs139329751 | -0.752 | 0.999 | D | 0.527 | 0.476 | 0.494433119893 | gnomAD-4.0.0 | 3.18157E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86541E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4036 | ambiguous | 0.4435 | ambiguous | -0.56 | Destabilizing | 0.999 | D | 0.641 | neutral | D | 0.583699543 | None | None | N |
E/C | 0.976 | likely_pathogenic | 0.9782 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/D | 0.6655 | likely_pathogenic | 0.7077 | pathogenic | -1.3 | Destabilizing | 0.999 | D | 0.463 | neutral | D | 0.570494592 | None | None | N |
E/F | 0.9583 | likely_pathogenic | 0.9668 | pathogenic | -0.961 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/G | 0.6235 | likely_pathogenic | 0.658 | pathogenic | -0.857 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | D | 0.730268537 | None | None | N |
E/H | 0.8861 | likely_pathogenic | 0.9077 | pathogenic | -1.21 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/I | 0.6863 | likely_pathogenic | 0.7264 | pathogenic | 0.225 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/K | 0.5221 | ambiguous | 0.575 | pathogenic | -0.689 | Destabilizing | 0.999 | D | 0.527 | neutral | D | 0.573401957 | None | None | N |
E/L | 0.8198 | likely_pathogenic | 0.8462 | pathogenic | 0.225 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/M | 0.7853 | likely_pathogenic | 0.8058 | pathogenic | 0.675 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/N | 0.8022 | likely_pathogenic | 0.8345 | pathogenic | -0.881 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/P | 0.9961 | likely_pathogenic | 0.9966 | pathogenic | -0.015 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/Q | 0.2994 | likely_benign | 0.3293 | benign | -0.778 | Destabilizing | 1.0 | D | 0.603 | neutral | D | 0.560152803 | None | None | N |
E/R | 0.695 | likely_pathogenic | 0.7371 | pathogenic | -0.719 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/S | 0.5482 | ambiguous | 0.5889 | pathogenic | -1.273 | Destabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | N |
E/T | 0.5806 | likely_pathogenic | 0.6154 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
E/V | 0.482 | ambiguous | 0.521 | ambiguous | -0.015 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.58616413 | None | None | N |
E/W | 0.9938 | likely_pathogenic | 0.9948 | pathogenic | -1.156 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/Y | 0.9531 | likely_pathogenic | 0.9622 | pathogenic | -0.797 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.