Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21970 | 66133;66134;66135 | chr2:178582548;178582547;178582546 | chr2:179447275;179447274;179447273 |
N2AB | 20329 | 61210;61211;61212 | chr2:178582548;178582547;178582546 | chr2:179447275;179447274;179447273 |
N2A | 19402 | 58429;58430;58431 | chr2:178582548;178582547;178582546 | chr2:179447275;179447274;179447273 |
N2B | 12905 | 38938;38939;38940 | chr2:178582548;178582547;178582546 | chr2:179447275;179447274;179447273 |
Novex-1 | 13030 | 39313;39314;39315 | chr2:178582548;178582547;178582546 | chr2:179447275;179447274;179447273 |
Novex-2 | 13097 | 39514;39515;39516 | chr2:178582548;178582547;178582546 | chr2:179447275;179447274;179447273 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.062 | N | 0.421 | 0.252 | None | gnomAD-4.0.0 | 2.05488E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70054E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0487 | likely_benign | 0.0466 | benign | -0.373 | Destabilizing | None | N | 0.067 | neutral | N | 0.442061033 | None | None | N |
S/C | 0.0995 | likely_benign | 0.091 | benign | -0.696 | Destabilizing | 0.824 | D | 0.413 | neutral | None | None | None | None | N |
S/D | 0.6975 | likely_pathogenic | 0.6819 | pathogenic | -1.863 | Destabilizing | 0.149 | N | 0.313 | neutral | None | None | None | None | N |
S/E | 0.6372 | likely_pathogenic | 0.6201 | pathogenic | -1.81 | Destabilizing | 0.149 | N | 0.332 | neutral | None | None | None | None | N |
S/F | 0.3737 | ambiguous | 0.3706 | ambiguous | -0.564 | Destabilizing | 0.555 | D | 0.489 | neutral | None | None | None | None | N |
S/G | 0.0902 | likely_benign | 0.0832 | benign | -0.635 | Destabilizing | 0.035 | N | 0.373 | neutral | None | None | None | None | N |
S/H | 0.4754 | ambiguous | 0.4651 | ambiguous | -1.217 | Destabilizing | 0.935 | D | 0.412 | neutral | None | None | None | None | N |
S/I | 0.2973 | likely_benign | 0.3108 | benign | 0.224 | Stabilizing | 0.38 | N | 0.431 | neutral | None | None | None | None | N |
S/K | 0.6738 | likely_pathogenic | 0.6488 | pathogenic | -0.804 | Destabilizing | 0.149 | N | 0.34 | neutral | None | None | None | None | N |
S/L | 0.1643 | likely_benign | 0.1624 | benign | 0.224 | Stabilizing | 0.062 | N | 0.421 | neutral | N | 0.487719202 | None | None | N |
S/M | 0.2781 | likely_benign | 0.2727 | benign | 0.383 | Stabilizing | 0.555 | D | 0.417 | neutral | None | None | None | None | N |
S/N | 0.2761 | likely_benign | 0.2801 | benign | -1.219 | Destabilizing | 0.149 | N | 0.412 | neutral | None | None | None | None | N |
S/P | 0.1975 | likely_benign | 0.2626 | benign | 0.059 | Stabilizing | None | N | 0.186 | neutral | N | 0.510459538 | None | None | N |
S/Q | 0.4906 | ambiguous | 0.478 | ambiguous | -1.339 | Destabilizing | 0.555 | D | 0.373 | neutral | None | None | None | None | N |
S/R | 0.5972 | likely_pathogenic | 0.5684 | pathogenic | -0.715 | Destabilizing | 0.38 | N | 0.385 | neutral | None | None | None | None | N |
S/T | 0.1353 | likely_benign | 0.1315 | benign | -0.886 | Destabilizing | 0.002 | N | 0.099 | neutral | N | 0.473663417 | None | None | N |
S/V | 0.2262 | likely_benign | 0.2395 | benign | 0.059 | Stabilizing | 0.081 | N | 0.421 | neutral | None | None | None | None | N |
S/W | 0.5498 | ambiguous | 0.5243 | ambiguous | -0.783 | Destabilizing | 0.935 | D | 0.578 | neutral | None | None | None | None | N |
S/Y | 0.3558 | ambiguous | 0.3292 | benign | -0.376 | Destabilizing | 0.555 | D | 0.493 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.