Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21971 | 66136;66137;66138 | chr2:178582545;178582544;178582543 | chr2:179447272;179447271;179447270 |
N2AB | 20330 | 61213;61214;61215 | chr2:178582545;178582544;178582543 | chr2:179447272;179447271;179447270 |
N2A | 19403 | 58432;58433;58434 | chr2:178582545;178582544;178582543 | chr2:179447272;179447271;179447270 |
N2B | 12906 | 38941;38942;38943 | chr2:178582545;178582544;178582543 | chr2:179447272;179447271;179447270 |
Novex-1 | 13031 | 39316;39317;39318 | chr2:178582545;178582544;178582543 | chr2:179447272;179447271;179447270 |
Novex-2 | 13098 | 39517;39518;39519 | chr2:178582545;178582544;178582543 | chr2:179447272;179447271;179447270 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1313945258 | None | 0.979 | N | 0.414 | 0.199 | 0.293147016451 | gnomAD-4.0.0 | 6.84795E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.6581E-05 |
D/N | None | None | 0.998 | N | 0.679 | 0.324 | 0.306053231325 | gnomAD-4.0.0 | 1.59448E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86402E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8274 | likely_pathogenic | 0.7306 | pathogenic | -0.833 | Destabilizing | 0.919 | D | 0.649 | neutral | N | 0.467711935 | None | None | N |
D/C | 0.9606 | likely_pathogenic | 0.9293 | pathogenic | -0.326 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
D/E | 0.4967 | ambiguous | 0.4368 | ambiguous | -0.874 | Destabilizing | 0.979 | D | 0.414 | neutral | N | 0.443695829 | None | None | N |
D/F | 0.9579 | likely_pathogenic | 0.9438 | pathogenic | -0.828 | Destabilizing | 0.991 | D | 0.761 | deleterious | None | None | None | None | N |
D/G | 0.6906 | likely_pathogenic | 0.5796 | pathogenic | -1.123 | Destabilizing | 0.979 | D | 0.688 | prob.neutral | N | 0.474282074 | None | None | N |
D/H | 0.8486 | likely_pathogenic | 0.7812 | pathogenic | -1.08 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | N | 0.46952236 | None | None | N |
D/I | 0.9474 | likely_pathogenic | 0.9151 | pathogenic | -0.075 | Destabilizing | 0.982 | D | 0.741 | deleterious | None | None | None | None | N |
D/K | 0.9397 | likely_pathogenic | 0.9087 | pathogenic | -0.382 | Destabilizing | 0.995 | D | 0.779 | deleterious | None | None | None | None | N |
D/L | 0.9257 | likely_pathogenic | 0.8943 | pathogenic | -0.075 | Destabilizing | 0.982 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/M | 0.9628 | likely_pathogenic | 0.945 | pathogenic | 0.444 | Stabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/N | 0.2864 | likely_benign | 0.243 | benign | -0.691 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | N | 0.473130514 | None | None | N |
D/P | 0.9899 | likely_pathogenic | 0.9843 | pathogenic | -0.305 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
D/Q | 0.8581 | likely_pathogenic | 0.8001 | pathogenic | -0.651 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
D/R | 0.9359 | likely_pathogenic | 0.9045 | pathogenic | -0.327 | Destabilizing | 0.995 | D | 0.769 | deleterious | None | None | None | None | N |
D/S | 0.5187 | ambiguous | 0.4059 | ambiguous | -0.959 | Destabilizing | 0.995 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/T | 0.6919 | likely_pathogenic | 0.5818 | pathogenic | -0.717 | Destabilizing | 0.991 | D | 0.736 | prob.delet. | None | None | None | None | N |
D/V | 0.8777 | likely_pathogenic | 0.8093 | pathogenic | -0.305 | Destabilizing | 0.142 | N | 0.471 | neutral | N | 0.50598436 | None | None | N |
D/W | 0.9893 | likely_pathogenic | 0.984 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
D/Y | 0.8185 | likely_pathogenic | 0.7441 | pathogenic | -0.58 | Destabilizing | 0.998 | D | 0.757 | deleterious | N | 0.50573087 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.