Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21973 | 66142;66143;66144 | chr2:178582539;178582538;178582537 | chr2:179447266;179447265;179447264 |
N2AB | 20332 | 61219;61220;61221 | chr2:178582539;178582538;178582537 | chr2:179447266;179447265;179447264 |
N2A | 19405 | 58438;58439;58440 | chr2:178582539;178582538;178582537 | chr2:179447266;179447265;179447264 |
N2B | 12908 | 38947;38948;38949 | chr2:178582539;178582538;178582537 | chr2:179447266;179447265;179447264 |
Novex-1 | 13033 | 39322;39323;39324 | chr2:178582539;178582538;178582537 | chr2:179447266;179447265;179447264 |
Novex-2 | 13100 | 39523;39524;39525 | chr2:178582539;178582538;178582537 | chr2:179447266;179447265;179447264 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.012 | N | 0.302 | 0.257 | 0.239305524855 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3642 | ambiguous | 0.3693 | ambiguous | -1.323 | Destabilizing | 0.996 | D | 0.693 | prob.neutral | None | None | None | None | N |
A/D | 0.9944 | likely_pathogenic | 0.9915 | pathogenic | -2.672 | Highly Destabilizing | 0.884 | D | 0.798 | deleterious | N | 0.501807304 | None | None | N |
A/E | 0.986 | likely_pathogenic | 0.9778 | pathogenic | -2.409 | Highly Destabilizing | 0.953 | D | 0.826 | deleterious | None | None | None | None | N |
A/F | 0.8241 | likely_pathogenic | 0.7989 | pathogenic | -0.703 | Destabilizing | 0.953 | D | 0.813 | deleterious | None | None | None | None | N |
A/G | 0.3955 | ambiguous | 0.3441 | ambiguous | -1.766 | Destabilizing | 0.007 | N | 0.366 | neutral | N | 0.500539857 | None | None | N |
A/H | 0.988 | likely_pathogenic | 0.9839 | pathogenic | -2.328 | Highly Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
A/I | 0.3695 | ambiguous | 0.3292 | benign | 0.322 | Stabilizing | 0.037 | N | 0.561 | neutral | None | None | None | None | N |
A/K | 0.9952 | likely_pathogenic | 0.9917 | pathogenic | -1.356 | Destabilizing | 0.91 | D | 0.827 | deleterious | None | None | None | None | N |
A/L | 0.3772 | ambiguous | 0.3359 | benign | 0.322 | Stabilizing | 0.373 | N | 0.657 | neutral | None | None | None | None | N |
A/M | 0.4516 | ambiguous | 0.3862 | ambiguous | -0.018 | Destabilizing | 0.953 | D | 0.799 | deleterious | None | None | None | None | N |
A/N | 0.9778 | likely_pathogenic | 0.9674 | pathogenic | -1.835 | Destabilizing | 0.91 | D | 0.813 | deleterious | None | None | None | None | N |
A/P | 0.9915 | likely_pathogenic | 0.9917 | pathogenic | -0.145 | Destabilizing | 0.979 | D | 0.827 | deleterious | N | 0.501553815 | None | None | N |
A/Q | 0.9682 | likely_pathogenic | 0.953 | pathogenic | -1.515 | Destabilizing | 0.984 | D | 0.804 | deleterious | None | None | None | None | N |
A/R | 0.9875 | likely_pathogenic | 0.9807 | pathogenic | -1.593 | Destabilizing | 0.953 | D | 0.825 | deleterious | None | None | None | None | N |
A/S | 0.3883 | ambiguous | 0.3551 | ambiguous | -2.255 | Highly Destabilizing | 0.684 | D | 0.649 | neutral | N | 0.474802279 | None | None | N |
A/T | 0.3639 | ambiguous | 0.299 | benign | -1.844 | Destabilizing | 0.684 | D | 0.676 | prob.neutral | N | 0.489437041 | None | None | N |
A/V | 0.155 | likely_benign | 0.1396 | benign | -0.145 | Destabilizing | 0.012 | N | 0.302 | neutral | N | 0.38951184 | None | None | N |
A/W | 0.9905 | likely_pathogenic | 0.9886 | pathogenic | -1.595 | Destabilizing | 0.996 | D | 0.781 | deleterious | None | None | None | None | N |
A/Y | 0.9577 | likely_pathogenic | 0.9491 | pathogenic | -1.003 | Destabilizing | 0.984 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.