Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21974 | 66145;66146;66147 | chr2:178582536;178582535;178582534 | chr2:179447263;179447262;179447261 |
N2AB | 20333 | 61222;61223;61224 | chr2:178582536;178582535;178582534 | chr2:179447263;179447262;179447261 |
N2A | 19406 | 58441;58442;58443 | chr2:178582536;178582535;178582534 | chr2:179447263;179447262;179447261 |
N2B | 12909 | 38950;38951;38952 | chr2:178582536;178582535;178582534 | chr2:179447263;179447262;179447261 |
Novex-1 | 13034 | 39325;39326;39327 | chr2:178582536;178582535;178582534 | chr2:179447263;179447262;179447261 |
Novex-2 | 13101 | 39526;39527;39528 | chr2:178582536;178582535;178582534 | chr2:179447263;179447262;179447261 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs751625996 | -0.378 | 0.101 | N | 0.275 | 0.193 | 0.365317461125 | gnomAD-2.1.1 | 7.67E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.21931E-04 | None | 0 | 0 | 0 |
M/I | rs751625996 | -0.378 | 0.101 | N | 0.275 | 0.193 | 0.365317461125 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
M/I | rs751625996 | -0.378 | 0.101 | N | 0.275 | 0.193 | 0.365317461125 | gnomAD-4.0.0 | 2.79036E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.94419E-04 | 0 |
M/R | rs373530806 | 0.117 | 0.213 | N | 0.437 | 0.319 | 0.388010793773 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
M/R | rs373530806 | 0.117 | 0.213 | N | 0.437 | 0.319 | 0.388010793773 | gnomAD-4.0.0 | 1.36921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.32035E-05 | 0 |
M/T | rs373530806 | -0.51 | 0.183 | N | 0.388 | 0.304 | 0.438806408302 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
M/T | rs373530806 | -0.51 | 0.183 | N | 0.388 | 0.304 | 0.438806408302 | gnomAD-4.0.0 | 2.73842E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52653E-05 | None | 0 | 0 | 0 | 1.16017E-05 | 3.31576E-05 |
M/V | rs370691527 | -0.679 | 0.001 | N | 0.191 | 0.271 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
M/V | rs370691527 | -0.679 | 0.001 | N | 0.191 | 0.271 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/V | rs370691527 | -0.679 | 0.001 | N | 0.191 | 0.271 | None | gnomAD-4.0.0 | 8.68142E-06 | None | None | None | None | N | None | 2.67308E-05 | 0 | None | 0 | 2.23514E-05 | None | 0 | 0 | 7.63215E-06 | 0 | 3.20513E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.3287 | likely_benign | 0.2717 | benign | -2.11 | Highly Destabilizing | 0.061 | N | 0.306 | neutral | None | None | None | None | N |
M/C | 0.63 | likely_pathogenic | 0.6131 | pathogenic | -1.909 | Destabilizing | 0.94 | D | 0.511 | neutral | None | None | None | None | N |
M/D | 0.7329 | likely_pathogenic | 0.7105 | pathogenic | -1.233 | Destabilizing | 0.418 | N | 0.508 | neutral | None | None | None | None | N |
M/E | 0.4555 | ambiguous | 0.4511 | ambiguous | -1.134 | Destabilizing | 0.129 | N | 0.459 | neutral | None | None | None | None | N |
M/F | 0.2634 | likely_benign | 0.2628 | benign | -0.916 | Destabilizing | 0.418 | N | 0.375 | neutral | None | None | None | None | N |
M/G | 0.6328 | likely_pathogenic | 0.5685 | pathogenic | -2.498 | Highly Destabilizing | 0.418 | N | 0.501 | neutral | None | None | None | None | N |
M/H | 0.3574 | ambiguous | 0.3588 | ambiguous | -1.704 | Destabilizing | 0.836 | D | 0.559 | neutral | None | None | None | None | N |
M/I | 0.2555 | likely_benign | 0.202 | benign | -1.056 | Destabilizing | 0.101 | N | 0.275 | neutral | N | 0.403809289 | None | None | N |
M/K | 0.2856 | likely_benign | 0.2557 | benign | -0.963 | Destabilizing | None | N | 0.271 | neutral | N | 0.359365078 | None | None | N |
M/L | 0.1286 | likely_benign | 0.1174 | benign | -1.056 | Destabilizing | None | N | 0.187 | neutral | N | 0.377161405 | None | None | N |
M/N | 0.3776 | ambiguous | 0.3399 | benign | -0.972 | Destabilizing | 0.418 | N | 0.519 | neutral | None | None | None | None | N |
M/P | 0.976 | likely_pathogenic | 0.9694 | pathogenic | -1.382 | Destabilizing | 0.593 | D | 0.52 | neutral | None | None | None | None | N |
M/Q | 0.2377 | likely_benign | 0.2277 | benign | -0.949 | Destabilizing | 0.264 | N | 0.335 | neutral | None | None | None | None | N |
M/R | 0.3198 | likely_benign | 0.2953 | benign | -0.673 | Destabilizing | 0.213 | N | 0.437 | neutral | N | 0.402481137 | None | None | N |
M/S | 0.2624 | likely_benign | 0.2338 | benign | -1.635 | Destabilizing | 0.129 | N | 0.383 | neutral | None | None | None | None | N |
M/T | 0.1286 | likely_benign | 0.1096 | benign | -1.415 | Destabilizing | 0.183 | N | 0.388 | neutral | N | 0.300372703 | None | None | N |
M/V | 0.0737 | likely_benign | 0.0629 | benign | -1.382 | Destabilizing | 0.001 | N | 0.191 | neutral | N | 0.38410602 | None | None | N |
M/W | 0.6082 | likely_pathogenic | 0.6274 | pathogenic | -0.958 | Destabilizing | 0.983 | D | 0.503 | neutral | None | None | None | None | N |
M/Y | 0.4717 | ambiguous | 0.4752 | ambiguous | -0.97 | Destabilizing | 0.836 | D | 0.569 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.