Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21986 | 66181;66182;66183 | chr2:178582500;178582499;178582498 | chr2:179447227;179447226;179447225 |
N2AB | 20345 | 61258;61259;61260 | chr2:178582500;178582499;178582498 | chr2:179447227;179447226;179447225 |
N2A | 19418 | 58477;58478;58479 | chr2:178582500;178582499;178582498 | chr2:179447227;179447226;179447225 |
N2B | 12921 | 38986;38987;38988 | chr2:178582500;178582499;178582498 | chr2:179447227;179447226;179447225 |
Novex-1 | 13046 | 39361;39362;39363 | chr2:178582500;178582499;178582498 | chr2:179447227;179447226;179447225 |
Novex-2 | 13113 | 39562;39563;39564 | chr2:178582500;178582499;178582498 | chr2:179447227;179447226;179447225 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1170003837 | None | 0.994 | D | 0.705 | 0.395 | 0.464698922459 | gnomAD-4.0.0 | 1.59315E-06 | None | None | None | None | I | None | 0 | 2.28822E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1228 | likely_benign | 0.1253 | benign | -0.835 | Destabilizing | 0.63 | D | 0.58 | neutral | N | 0.487966681 | None | None | I |
S/C | 0.1612 | likely_benign | 0.1354 | benign | -0.546 | Destabilizing | 0.073 | N | 0.587 | neutral | None | None | None | None | I |
S/D | 0.8673 | likely_pathogenic | 0.8108 | pathogenic | -0.469 | Destabilizing | 0.996 | D | 0.711 | prob.delet. | None | None | None | None | I |
S/E | 0.9371 | likely_pathogenic | 0.9161 | pathogenic | -0.47 | Destabilizing | 0.996 | D | 0.714 | prob.delet. | None | None | None | None | I |
S/F | 0.7508 | likely_pathogenic | 0.7207 | pathogenic | -1.043 | Destabilizing | 0.987 | D | 0.716 | prob.delet. | None | None | None | None | I |
S/G | 0.3281 | likely_benign | 0.286 | benign | -1.085 | Destabilizing | 0.957 | D | 0.606 | neutral | None | None | None | None | I |
S/H | 0.8675 | likely_pathogenic | 0.8076 | pathogenic | -1.587 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | I |
S/I | 0.8216 | likely_pathogenic | 0.7699 | pathogenic | -0.275 | Destabilizing | 0.975 | D | 0.726 | prob.delet. | None | None | None | None | I |
S/K | 0.9902 | likely_pathogenic | 0.9848 | pathogenic | -0.812 | Destabilizing | 0.987 | D | 0.703 | prob.neutral | None | None | None | None | I |
S/L | 0.4561 | ambiguous | 0.3917 | ambiguous | -0.275 | Destabilizing | 0.805 | D | 0.671 | neutral | N | 0.491033657 | None | None | I |
S/M | 0.5747 | likely_pathogenic | 0.5181 | ambiguous | 0.106 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
S/N | 0.6275 | likely_pathogenic | 0.555 | ambiguous | -0.782 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | I |
S/P | 0.994 | likely_pathogenic | 0.9931 | pathogenic | -0.429 | Destabilizing | 0.994 | D | 0.705 | prob.neutral | D | 0.539928372 | None | None | I |
S/Q | 0.9235 | likely_pathogenic | 0.8975 | pathogenic | -0.948 | Destabilizing | 0.996 | D | 0.713 | prob.delet. | None | None | None | None | I |
S/R | 0.9826 | likely_pathogenic | 0.9726 | pathogenic | -0.695 | Destabilizing | 0.996 | D | 0.695 | prob.neutral | None | None | None | None | I |
S/T | 0.3524 | ambiguous | 0.3033 | benign | -0.781 | Destabilizing | 0.892 | D | 0.621 | neutral | N | 0.482702318 | None | None | I |
S/V | 0.7031 | likely_pathogenic | 0.6401 | pathogenic | -0.429 | Destabilizing | 0.975 | D | 0.705 | prob.neutral | None | None | None | None | I |
S/W | 0.8614 | likely_pathogenic | 0.8207 | pathogenic | -1.01 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | I |
S/Y | 0.7337 | likely_pathogenic | 0.6827 | pathogenic | -0.756 | Destabilizing | 0.996 | D | 0.716 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.