Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21987 | 66184;66185;66186 | chr2:178582497;178582496;178582495 | chr2:179447224;179447223;179447222 |
N2AB | 20346 | 61261;61262;61263 | chr2:178582497;178582496;178582495 | chr2:179447224;179447223;179447222 |
N2A | 19419 | 58480;58481;58482 | chr2:178582497;178582496;178582495 | chr2:179447224;179447223;179447222 |
N2B | 12922 | 38989;38990;38991 | chr2:178582497;178582496;178582495 | chr2:179447224;179447223;179447222 |
Novex-1 | 13047 | 39364;39365;39366 | chr2:178582497;178582496;178582495 | chr2:179447224;179447223;179447222 |
Novex-2 | 13114 | 39565;39566;39567 | chr2:178582497;178582496;178582495 | chr2:179447224;179447223;179447222 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.117 | N | 0.237 | 0.046 | 0.28798054836 | gnomAD-4.0.0 | 1.59322E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86164E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1373 | likely_benign | 0.1271 | benign | -0.325 | Destabilizing | 0.977 | D | 0.61 | neutral | N | 0.468631558 | None | None | I |
E/C | 0.8444 | likely_pathogenic | 0.8036 | pathogenic | 0.063 | Stabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
E/D | 0.1113 | likely_benign | 0.1022 | benign | -0.25 | Destabilizing | 0.117 | N | 0.237 | neutral | N | 0.455451617 | None | None | I |
E/F | 0.8409 | likely_pathogenic | 0.8019 | pathogenic | -0.257 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
E/G | 0.2362 | likely_benign | 0.2209 | benign | -0.512 | Destabilizing | 0.993 | D | 0.606 | neutral | N | 0.471207882 | None | None | I |
E/H | 0.5526 | ambiguous | 0.4851 | ambiguous | -0.051 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/I | 0.3919 | ambiguous | 0.3392 | benign | 0.127 | Stabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/K | 0.1922 | likely_benign | 0.1581 | benign | 0.411 | Stabilizing | 0.977 | D | 0.589 | neutral | N | 0.485889168 | None | None | I |
E/L | 0.4657 | ambiguous | 0.4013 | ambiguous | 0.127 | Stabilizing | 0.998 | D | 0.68 | prob.neutral | None | None | None | None | I |
E/M | 0.5139 | ambiguous | 0.4552 | ambiguous | 0.254 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/N | 0.2741 | likely_benign | 0.2289 | benign | 0.122 | Stabilizing | 0.99 | D | 0.698 | prob.neutral | None | None | None | None | I |
E/P | 0.2935 | likely_benign | 0.2539 | benign | -0.004 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | I |
E/Q | 0.1811 | likely_benign | 0.1553 | benign | 0.157 | Stabilizing | 0.997 | D | 0.651 | neutral | N | 0.508131309 | None | None | I |
E/R | 0.3431 | ambiguous | 0.2883 | benign | 0.558 | Stabilizing | 0.998 | D | 0.736 | prob.delet. | None | None | None | None | I |
E/S | 0.225 | likely_benign | 0.1921 | benign | -0.039 | Destabilizing | 0.983 | D | 0.612 | neutral | None | None | None | None | I |
E/T | 0.2416 | likely_benign | 0.2082 | benign | 0.117 | Stabilizing | 0.995 | D | 0.639 | neutral | None | None | None | None | I |
E/V | 0.2255 | likely_benign | 0.1992 | benign | -0.004 | Destabilizing | 0.997 | D | 0.7 | prob.neutral | N | 0.472587007 | None | None | I |
E/W | 0.9456 | likely_pathogenic | 0.9332 | pathogenic | -0.127 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
E/Y | 0.7327 | likely_pathogenic | 0.6965 | pathogenic | -0.016 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.