Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21988 | 66187;66188;66189 | chr2:178582494;178582493;178582492 | chr2:179447221;179447220;179447219 |
N2AB | 20347 | 61264;61265;61266 | chr2:178582494;178582493;178582492 | chr2:179447221;179447220;179447219 |
N2A | 19420 | 58483;58484;58485 | chr2:178582494;178582493;178582492 | chr2:179447221;179447220;179447219 |
N2B | 12923 | 38992;38993;38994 | chr2:178582494;178582493;178582492 | chr2:179447221;179447220;179447219 |
Novex-1 | 13048 | 39367;39368;39369 | chr2:178582494;178582493;178582492 | chr2:179447221;179447220;179447219 |
Novex-2 | 13115 | 39568;39569;39570 | chr2:178582494;178582493;178582492 | chr2:179447221;179447220;179447219 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.993 | N | 0.405 | 0.394 | 0.670927618927 | gnomAD-4.0.0 | 1.5932E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86157E-06 | 0 | 0 |
I/T | rs776884578 | -1.866 | 1.0 | D | 0.825 | 0.591 | 0.787357044059 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
I/T | rs776884578 | -1.866 | 1.0 | D | 0.825 | 0.591 | 0.787357044059 | gnomAD-4.0.0 | 7.53029E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.27607E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9906 | likely_pathogenic | 0.9861 | pathogenic | -2.359 | Highly Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | I |
I/C | 0.991 | likely_pathogenic | 0.9876 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
I/D | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -2.354 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
I/E | 0.9969 | likely_pathogenic | 0.9966 | pathogenic | -2.296 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
I/F | 0.9778 | likely_pathogenic | 0.9676 | pathogenic | -1.723 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.539349395 | None | None | I |
I/G | 0.9983 | likely_pathogenic | 0.9977 | pathogenic | -2.761 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
I/H | 0.9989 | likely_pathogenic | 0.9984 | pathogenic | -2.02 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
I/K | 0.9937 | likely_pathogenic | 0.9915 | pathogenic | -1.713 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
I/L | 0.6552 | likely_pathogenic | 0.5298 | ambiguous | -1.267 | Destabilizing | 0.993 | D | 0.405 | neutral | N | 0.491771353 | None | None | I |
I/M | 0.7609 | likely_pathogenic | 0.6875 | pathogenic | -0.885 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.54188429 | None | None | I |
I/N | 0.9832 | likely_pathogenic | 0.9791 | pathogenic | -1.639 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.536150299 | None | None | I |
I/P | 0.984 | likely_pathogenic | 0.9774 | pathogenic | -1.605 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
I/Q | 0.9972 | likely_pathogenic | 0.9962 | pathogenic | -1.79 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
I/R | 0.9939 | likely_pathogenic | 0.9914 | pathogenic | -1.076 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
I/S | 0.9935 | likely_pathogenic | 0.991 | pathogenic | -2.264 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.54213778 | None | None | I |
I/T | 0.9771 | likely_pathogenic | 0.9694 | pathogenic | -2.085 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.530781474 | None | None | I |
I/V | 0.1625 | likely_benign | 0.1483 | benign | -1.605 | Destabilizing | 0.993 | D | 0.391 | neutral | N | 0.491279132 | None | None | I |
I/W | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -1.91 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
I/Y | 0.9961 | likely_pathogenic | 0.9942 | pathogenic | -1.704 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.