Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21991 | 66196;66197;66198 | chr2:178582485;178582484;178582483 | chr2:179447212;179447211;179447210 |
N2AB | 20350 | 61273;61274;61275 | chr2:178582485;178582484;178582483 | chr2:179447212;179447211;179447210 |
N2A | 19423 | 58492;58493;58494 | chr2:178582485;178582484;178582483 | chr2:179447212;179447211;179447210 |
N2B | 12926 | 39001;39002;39003 | chr2:178582485;178582484;178582483 | chr2:179447212;179447211;179447210 |
Novex-1 | 13051 | 39376;39377;39378 | chr2:178582485;178582484;178582483 | chr2:179447212;179447211;179447210 |
Novex-2 | 13118 | 39577;39578;39579 | chr2:178582485;178582484;178582483 | chr2:179447212;179447211;179447210 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | None | None | 1.0 | D | 0.896 | 0.9 | 0.894210320649 | gnomAD-4.0.0 | 1.5932E-06 | None | None | None | None | N | None | 0 | 2.28822E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/H | rs1407550215 | None | 1.0 | D | 0.823 | 0.878 | 0.775338622076 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/H | rs1407550215 | None | 1.0 | D | 0.823 | 0.878 | 0.775338622076 | gnomAD-4.0.0 | 1.31506E-05 | None | None | None | None | N | None | 2.41348E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47089E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9994 | likely_pathogenic | 0.999 | pathogenic | -3.71 | Highly Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
Y/C | 0.9813 | likely_pathogenic | 0.9696 | pathogenic | -2.119 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.662799268 | None | None | N |
Y/D | 0.9992 | likely_pathogenic | 0.9988 | pathogenic | -3.89 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | D | 0.663001072 | None | None | N |
Y/E | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.686 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
Y/F | 0.3 | likely_benign | 0.2679 | benign | -1.423 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | D | 0.56975304 | None | None | N |
Y/G | 0.9976 | likely_pathogenic | 0.9964 | pathogenic | -4.089 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
Y/H | 0.9937 | likely_pathogenic | 0.9897 | pathogenic | -2.668 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.66239566 | None | None | N |
Y/I | 0.9922 | likely_pathogenic | 0.9876 | pathogenic | -2.412 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/K | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -2.555 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
Y/L | 0.9833 | likely_pathogenic | 0.9783 | pathogenic | -2.412 | Highly Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
Y/M | 0.9961 | likely_pathogenic | 0.9941 | pathogenic | -2.165 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Y/N | 0.9955 | likely_pathogenic | 0.9928 | pathogenic | -3.27 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.662799268 | None | None | N |
Y/P | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -2.865 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
Y/Q | 0.9997 | likely_pathogenic | 0.9994 | pathogenic | -3.044 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/R | 0.9984 | likely_pathogenic | 0.9974 | pathogenic | -2.239 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/S | 0.9977 | likely_pathogenic | 0.9963 | pathogenic | -3.589 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.662799268 | None | None | N |
Y/T | 0.9991 | likely_pathogenic | 0.9985 | pathogenic | -3.277 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Y/V | 0.9859 | likely_pathogenic | 0.9801 | pathogenic | -2.865 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
Y/W | 0.9189 | likely_pathogenic | 0.9023 | pathogenic | -0.612 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.