Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21994 | 66205;66206;66207 | chr2:178582476;178582475;178582474 | chr2:179447203;179447202;179447201 |
N2AB | 20353 | 61282;61283;61284 | chr2:178582476;178582475;178582474 | chr2:179447203;179447202;179447201 |
N2A | 19426 | 58501;58502;58503 | chr2:178582476;178582475;178582474 | chr2:179447203;179447202;179447201 |
N2B | 12929 | 39010;39011;39012 | chr2:178582476;178582475;178582474 | chr2:179447203;179447202;179447201 |
Novex-1 | 13054 | 39385;39386;39387 | chr2:178582476;178582475;178582474 | chr2:179447203;179447202;179447201 |
Novex-2 | 13121 | 39586;39587;39588 | chr2:178582476;178582475;178582474 | chr2:179447203;179447202;179447201 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.011 | N | 0.345 | 0.094 | 0.141422826196 | gnomAD-4.0.0 | 1.20036E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31255E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8869 | likely_pathogenic | 0.8465 | pathogenic | -0.927 | Destabilizing | 0.892 | D | 0.695 | prob.neutral | N | 0.517286723 | None | None | N |
D/C | 0.9753 | likely_pathogenic | 0.9569 | pathogenic | -0.252 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
D/E | 0.5551 | ambiguous | 0.5001 | ambiguous | -0.664 | Destabilizing | 0.011 | N | 0.345 | neutral | N | 0.318209102 | None | None | N |
D/F | 0.9527 | likely_pathogenic | 0.9338 | pathogenic | -0.728 | Destabilizing | 0.996 | D | 0.81 | deleterious | None | None | None | None | N |
D/G | 0.9372 | likely_pathogenic | 0.9115 | pathogenic | -1.333 | Destabilizing | 0.892 | D | 0.699 | prob.neutral | N | 0.518500231 | None | None | N |
D/H | 0.9043 | likely_pathogenic | 0.8471 | pathogenic | -0.686 | Destabilizing | 0.995 | D | 0.747 | deleterious | N | 0.468152781 | None | None | N |
D/I | 0.9694 | likely_pathogenic | 0.9486 | pathogenic | 0.201 | Stabilizing | 0.987 | D | 0.815 | deleterious | None | None | None | None | N |
D/K | 0.9793 | likely_pathogenic | 0.9721 | pathogenic | -0.927 | Destabilizing | 0.845 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/L | 0.9387 | likely_pathogenic | 0.9222 | pathogenic | 0.201 | Stabilizing | 0.975 | D | 0.765 | deleterious | None | None | None | None | N |
D/M | 0.9804 | likely_pathogenic | 0.9692 | pathogenic | 0.841 | Stabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
D/N | 0.7014 | likely_pathogenic | 0.6371 | pathogenic | -1.171 | Destabilizing | 0.892 | D | 0.696 | prob.neutral | N | 0.49570073 | None | None | N |
D/P | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -0.155 | Destabilizing | 0.987 | D | 0.716 | prob.delet. | None | None | None | None | N |
D/Q | 0.9145 | likely_pathogenic | 0.8746 | pathogenic | -0.826 | Destabilizing | 0.95 | D | 0.731 | prob.delet. | None | None | None | None | N |
D/R | 0.9804 | likely_pathogenic | 0.9718 | pathogenic | -0.932 | Destabilizing | 0.975 | D | 0.703 | prob.neutral | None | None | None | None | N |
D/S | 0.7473 | likely_pathogenic | 0.6758 | pathogenic | -1.781 | Destabilizing | 0.916 | D | 0.656 | neutral | None | None | None | None | N |
D/T | 0.9403 | likely_pathogenic | 0.9078 | pathogenic | -1.392 | Destabilizing | 0.975 | D | 0.717 | prob.delet. | None | None | None | None | N |
D/V | 0.9277 | likely_pathogenic | 0.8894 | pathogenic | -0.155 | Destabilizing | 0.983 | D | 0.761 | deleterious | N | 0.51026475 | None | None | N |
D/W | 0.9899 | likely_pathogenic | 0.9817 | pathogenic | -0.904 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
D/Y | 0.8197 | likely_pathogenic | 0.7355 | pathogenic | -0.545 | Destabilizing | 0.994 | D | 0.811 | deleterious | N | 0.473343945 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.