Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21995 | 66208;66209;66210 | chr2:178582473;178582472;178582471 | chr2:179447200;179447199;179447198 |
N2AB | 20354 | 61285;61286;61287 | chr2:178582473;178582472;178582471 | chr2:179447200;179447199;179447198 |
N2A | 19427 | 58504;58505;58506 | chr2:178582473;178582472;178582471 | chr2:179447200;179447199;179447198 |
N2B | 12930 | 39013;39014;39015 | chr2:178582473;178582472;178582471 | chr2:179447200;179447199;179447198 |
Novex-1 | 13055 | 39388;39389;39390 | chr2:178582473;178582472;178582471 | chr2:179447200;179447199;179447198 |
Novex-2 | 13122 | 39589;39590;39591 | chr2:178582473;178582472;178582471 | chr2:179447200;179447199;179447198 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs773998370 | -0.696 | 0.032 | N | 0.467 | 0.153 | 0.241664281697 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
K/R | rs773998370 | -0.696 | 0.032 | N | 0.467 | 0.153 | 0.241664281697 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs773998370 | -0.696 | 0.032 | N | 0.467 | 0.153 | 0.241664281697 | gnomAD-4.0.0 | 3.84756E-06 | None | None | None | None | N | None | 0 | 1.69618E-05 | None | 0 | 0 | None | 0 | 0 | 4.79099E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9951 | likely_pathogenic | 0.996 | pathogenic | -1.51 | Destabilizing | 0.754 | D | 0.665 | neutral | None | None | None | None | N |
K/C | 0.9816 | likely_pathogenic | 0.9829 | pathogenic | -1.389 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
K/D | 0.9995 | likely_pathogenic | 0.9997 | pathogenic | -2.21 | Highly Destabilizing | 0.978 | D | 0.688 | prob.neutral | None | None | None | None | N |
K/E | 0.9946 | likely_pathogenic | 0.9953 | pathogenic | -1.87 | Destabilizing | 0.822 | D | 0.663 | neutral | N | 0.517630154 | None | None | N |
K/F | 0.9962 | likely_pathogenic | 0.998 | pathogenic | -0.726 | Destabilizing | 0.956 | D | 0.788 | deleterious | None | None | None | None | N |
K/G | 0.9969 | likely_pathogenic | 0.9973 | pathogenic | -2.002 | Highly Destabilizing | 0.978 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/H | 0.946 | likely_pathogenic | 0.9583 | pathogenic | -1.719 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/I | 0.9832 | likely_pathogenic | 0.9858 | pathogenic | -0.086 | Destabilizing | 0.89 | D | 0.77 | deleterious | N | 0.478406223 | None | None | N |
K/L | 0.9728 | likely_pathogenic | 0.9785 | pathogenic | -0.086 | Destabilizing | 0.514 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/M | 0.9519 | likely_pathogenic | 0.9609 | pathogenic | -0.523 | Destabilizing | 0.304 | N | 0.612 | neutral | None | None | None | None | N |
K/N | 0.9987 | likely_pathogenic | 0.999 | pathogenic | -1.863 | Destabilizing | 0.971 | D | 0.631 | neutral | D | 0.528986459 | None | None | N |
K/P | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -0.545 | Destabilizing | 0.993 | D | 0.706 | prob.neutral | None | None | None | None | N |
K/Q | 0.9323 | likely_pathogenic | 0.9363 | pathogenic | -1.407 | Destabilizing | 0.942 | D | 0.648 | neutral | N | 0.470065338 | None | None | N |
K/R | 0.1808 | likely_benign | 0.1925 | benign | -0.818 | Destabilizing | 0.032 | N | 0.467 | neutral | N | 0.466089899 | None | None | N |
K/S | 0.9976 | likely_pathogenic | 0.9979 | pathogenic | -2.325 | Highly Destabilizing | 0.86 | D | 0.649 | neutral | None | None | None | None | N |
K/T | 0.9878 | likely_pathogenic | 0.9891 | pathogenic | -1.721 | Destabilizing | 0.942 | D | 0.675 | neutral | N | 0.493485511 | None | None | N |
K/V | 0.9742 | likely_pathogenic | 0.9774 | pathogenic | -0.545 | Destabilizing | 0.754 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/W | 0.9937 | likely_pathogenic | 0.9959 | pathogenic | -0.814 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
K/Y | 0.9835 | likely_pathogenic | 0.989 | pathogenic | -0.467 | Destabilizing | 0.978 | D | 0.76 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.