Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2200 | 6823;6824;6825 | chr2:178775113;178775112;178775111 | chr2:179639840;179639839;179639838 |
N2AB | 2200 | 6823;6824;6825 | chr2:178775113;178775112;178775111 | chr2:179639840;179639839;179639838 |
N2A | 2200 | 6823;6824;6825 | chr2:178775113;178775112;178775111 | chr2:179639840;179639839;179639838 |
N2B | 2154 | 6685;6686;6687 | chr2:178775113;178775112;178775111 | chr2:179639840;179639839;179639838 |
Novex-1 | 2154 | 6685;6686;6687 | chr2:178775113;178775112;178775111 | chr2:179639840;179639839;179639838 |
Novex-2 | 2154 | 6685;6686;6687 | chr2:178775113;178775112;178775111 | chr2:179639840;179639839;179639838 |
Novex-3 | 2200 | 6823;6824;6825 | chr2:178775113;178775112;178775111 | chr2:179639840;179639839;179639838 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1378587847 | 0.036 | 0.999 | N | 0.73 | 0.362 | 0.212008924253 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.63399E-04 |
E/K | rs1378587847 | 0.036 | 0.999 | N | 0.73 | 0.362 | 0.212008924253 | gnomAD-4.0.0 | 6.84119E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.93481E-04 | 3.59731E-06 | 0 | 3.3117E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2999 | likely_benign | 0.3405 | ambiguous | -0.481 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | N | 0.316855038 | None | None | N |
E/C | 0.9603 | likely_pathogenic | 0.9654 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/D | 0.3158 | likely_benign | 0.3501 | ambiguous | -0.466 | Destabilizing | 0.999 | D | 0.539 | neutral | N | 0.344208319 | None | None | N |
E/F | 0.8897 | likely_pathogenic | 0.9081 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/G | 0.45 | ambiguous | 0.5006 | ambiguous | -0.726 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.331519927 | None | None | N |
E/H | 0.7534 | likely_pathogenic | 0.7924 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/I | 0.5935 | likely_pathogenic | 0.6366 | pathogenic | 0.15 | Stabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
E/K | 0.3649 | ambiguous | 0.4371 | ambiguous | 0.187 | Stabilizing | 0.999 | D | 0.73 | prob.delet. | N | 0.348620668 | None | None | N |
E/L | 0.6131 | likely_pathogenic | 0.6643 | pathogenic | 0.15 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/M | 0.6646 | likely_pathogenic | 0.7073 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/N | 0.5772 | likely_pathogenic | 0.6263 | pathogenic | -0.326 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
E/P | 0.9543 | likely_pathogenic | 0.9545 | pathogenic | -0.04 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/Q | 0.2461 | likely_benign | 0.2813 | benign | -0.243 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.34527008 | None | None | N |
E/R | 0.5492 | ambiguous | 0.6152 | pathogenic | 0.494 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/S | 0.4098 | ambiguous | 0.4553 | ambiguous | -0.481 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
E/T | 0.4997 | ambiguous | 0.5489 | ambiguous | -0.272 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/V | 0.3873 | ambiguous | 0.4235 | ambiguous | -0.04 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.327970811 | None | None | N |
E/W | 0.9793 | likely_pathogenic | 0.9837 | pathogenic | 0.113 | Stabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/Y | 0.8343 | likely_pathogenic | 0.8635 | pathogenic | 0.144 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.