Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22011 | 66256;66257;66258 | chr2:178582425;178582424;178582423 | chr2:179447152;179447151;179447150 |
N2AB | 20370 | 61333;61334;61335 | chr2:178582425;178582424;178582423 | chr2:179447152;179447151;179447150 |
N2A | 19443 | 58552;58553;58554 | chr2:178582425;178582424;178582423 | chr2:179447152;179447151;179447150 |
N2B | 12946 | 39061;39062;39063 | chr2:178582425;178582424;178582423 | chr2:179447152;179447151;179447150 |
Novex-1 | 13071 | 39436;39437;39438 | chr2:178582425;178582424;178582423 | chr2:179447152;179447151;179447150 |
Novex-2 | 13138 | 39637;39638;39639 | chr2:178582425;178582424;178582423 | chr2:179447152;179447151;179447150 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | None | None | 0.002 | N | 0.229 | 0.259 | 0.24896430686 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
P/S | rs758402332 | -0.667 | 0.351 | N | 0.306 | 0.279 | 0.233150807113 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
P/S | rs758402332 | -0.667 | 0.351 | N | 0.306 | 0.279 | 0.233150807113 | gnomAD-4.0.0 | 3.18631E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72246E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1004 | likely_benign | 0.0885 | benign | -0.818 | Destabilizing | 0.183 | N | 0.287 | neutral | N | 0.471477076 | None | None | N |
P/C | 0.6344 | likely_pathogenic | 0.5536 | ambiguous | -0.823 | Destabilizing | 0.983 | D | 0.327 | neutral | None | None | None | None | N |
P/D | 0.5089 | ambiguous | 0.506 | ambiguous | -0.329 | Destabilizing | 0.002 | N | 0.151 | neutral | None | None | None | None | N |
P/E | 0.3169 | likely_benign | 0.308 | benign | -0.388 | Destabilizing | 0.129 | N | 0.294 | neutral | None | None | None | None | N |
P/F | 0.6682 | likely_pathogenic | 0.6113 | pathogenic | -0.724 | Destabilizing | 0.557 | D | 0.363 | neutral | None | None | None | None | N |
P/G | 0.3238 | likely_benign | 0.2908 | benign | -1.027 | Destabilizing | 0.418 | N | 0.313 | neutral | None | None | None | None | N |
P/H | 0.2768 | likely_benign | 0.2404 | benign | -0.427 | Destabilizing | 0.002 | N | 0.229 | neutral | N | 0.45341139 | None | None | N |
P/I | 0.4468 | ambiguous | 0.3708 | ambiguous | -0.389 | Destabilizing | 0.557 | D | 0.39 | neutral | None | None | None | None | N |
P/K | 0.2979 | likely_benign | 0.2827 | benign | -0.688 | Destabilizing | 0.264 | N | 0.311 | neutral | None | None | None | None | N |
P/L | 0.1797 | likely_benign | 0.1502 | benign | -0.389 | Destabilizing | 0.002 | N | 0.242 | neutral | N | 0.500165187 | None | None | N |
P/M | 0.385 | ambiguous | 0.3187 | benign | -0.483 | Destabilizing | 0.716 | D | 0.319 | neutral | None | None | None | None | N |
P/N | 0.35 | ambiguous | 0.3133 | benign | -0.54 | Destabilizing | 0.418 | N | 0.324 | neutral | None | None | None | None | N |
P/Q | 0.1732 | likely_benign | 0.1482 | benign | -0.717 | Destabilizing | 0.01 | N | 0.143 | neutral | None | None | None | None | N |
P/R | 0.2435 | likely_benign | 0.2226 | benign | -0.172 | Destabilizing | 0.213 | N | 0.355 | neutral | N | 0.432670758 | None | None | N |
P/S | 0.1499 | likely_benign | 0.1317 | benign | -1.001 | Destabilizing | 0.351 | N | 0.306 | neutral | N | 0.440018018 | None | None | N |
P/T | 0.1285 | likely_benign | 0.1128 | benign | -0.948 | Destabilizing | 0.351 | N | 0.311 | neutral | N | 0.422104261 | None | None | N |
P/V | 0.2923 | likely_benign | 0.243 | benign | -0.496 | Destabilizing | 0.264 | N | 0.319 | neutral | None | None | None | None | N |
P/W | 0.8001 | likely_pathogenic | 0.7551 | pathogenic | -0.817 | Destabilizing | 0.983 | D | 0.342 | neutral | None | None | None | None | N |
P/Y | 0.6124 | likely_pathogenic | 0.5525 | ambiguous | -0.53 | Destabilizing | 0.716 | D | 0.376 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.