Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22012 | 66259;66260;66261 | chr2:178582422;178582421;178582420 | chr2:179447149;179447148;179447147 |
N2AB | 20371 | 61336;61337;61338 | chr2:178582422;178582421;178582420 | chr2:179447149;179447148;179447147 |
N2A | 19444 | 58555;58556;58557 | chr2:178582422;178582421;178582420 | chr2:179447149;179447148;179447147 |
N2B | 12947 | 39064;39065;39066 | chr2:178582422;178582421;178582420 | chr2:179447149;179447148;179447147 |
Novex-1 | 13072 | 39439;39440;39441 | chr2:178582422;178582421;178582420 | chr2:179447149;179447148;179447147 |
Novex-2 | 13139 | 39640;39641;39642 | chr2:178582422;178582421;178582420 | chr2:179447149;179447148;179447147 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1356992317 | None | 0.016 | N | 0.174 | 0.237 | 0.37479162749 | gnomAD-4.0.0 | 1.59313E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86121E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2297 | likely_benign | 0.2444 | benign | -1.335 | Destabilizing | 0.25 | N | 0.307 | neutral | None | None | None | None | N |
I/C | 0.6575 | likely_pathogenic | 0.6572 | pathogenic | -0.806 | Destabilizing | 0.992 | D | 0.347 | neutral | None | None | None | None | N |
I/D | 0.5613 | ambiguous | 0.6146 | pathogenic | -0.94 | Destabilizing | 0.005 | N | 0.301 | neutral | None | None | None | None | N |
I/E | 0.4321 | ambiguous | 0.493 | ambiguous | -0.898 | Destabilizing | 0.447 | N | 0.389 | neutral | None | None | None | None | N |
I/F | 0.1766 | likely_benign | 0.2028 | benign | -0.867 | Destabilizing | 0.009 | N | 0.12 | neutral | N | 0.466801975 | None | None | N |
I/G | 0.4689 | ambiguous | 0.4994 | ambiguous | -1.633 | Destabilizing | 0.617 | D | 0.442 | neutral | None | None | None | None | N |
I/H | 0.491 | ambiguous | 0.5276 | ambiguous | -0.626 | Destabilizing | 0.992 | D | 0.366 | neutral | None | None | None | None | N |
I/K | 0.3514 | ambiguous | 0.3985 | ambiguous | -0.831 | Destabilizing | 0.021 | N | 0.303 | neutral | None | None | None | None | N |
I/L | 0.1062 | likely_benign | 0.1056 | benign | -0.582 | Destabilizing | 0.201 | N | 0.189 | neutral | N | 0.474477308 | None | None | N |
I/M | 0.0993 | likely_benign | 0.1044 | benign | -0.645 | Destabilizing | 0.896 | D | 0.381 | neutral | N | 0.494545936 | None | None | N |
I/N | 0.2176 | likely_benign | 0.2458 | benign | -0.888 | Destabilizing | 0.681 | D | 0.433 | neutral | N | 0.4662819 | None | None | N |
I/P | 0.8711 | likely_pathogenic | 0.8478 | pathogenic | -0.805 | Destabilizing | 0.92 | D | 0.433 | neutral | None | None | None | None | N |
I/Q | 0.3785 | ambiguous | 0.418 | ambiguous | -0.981 | Destabilizing | 0.85 | D | 0.431 | neutral | None | None | None | None | N |
I/R | 0.3444 | ambiguous | 0.3793 | ambiguous | -0.306 | Destabilizing | 0.739 | D | 0.425 | neutral | None | None | None | None | N |
I/S | 0.2257 | likely_benign | 0.2424 | benign | -1.413 | Destabilizing | 0.379 | N | 0.369 | neutral | N | 0.389474555 | None | None | N |
I/T | 0.1849 | likely_benign | 0.2217 | benign | -1.251 | Destabilizing | 0.016 | N | 0.174 | neutral | N | 0.385180669 | None | None | N |
I/V | 0.0652 | likely_benign | 0.0675 | benign | -0.805 | Destabilizing | 0.016 | N | 0.11 | neutral | N | 0.440172734 | None | None | N |
I/W | 0.8248 | likely_pathogenic | 0.8451 | pathogenic | -0.959 | Destabilizing | 0.992 | D | 0.397 | neutral | None | None | None | None | N |
I/Y | 0.5321 | ambiguous | 0.5415 | ambiguous | -0.699 | Destabilizing | 0.739 | D | 0.419 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.