Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22013 | 66262;66263;66264 | chr2:178582419;178582418;178582417 | chr2:179447146;179447145;179447144 |
N2AB | 20372 | 61339;61340;61341 | chr2:178582419;178582418;178582417 | chr2:179447146;179447145;179447144 |
N2A | 19445 | 58558;58559;58560 | chr2:178582419;178582418;178582417 | chr2:179447146;179447145;179447144 |
N2B | 12948 | 39067;39068;39069 | chr2:178582419;178582418;178582417 | chr2:179447146;179447145;179447144 |
Novex-1 | 13073 | 39442;39443;39444 | chr2:178582419;178582418;178582417 | chr2:179447146;179447145;179447144 |
Novex-2 | 13140 | 39643;39644;39645 | chr2:178582419;178582418;178582417 | chr2:179447146;179447145;179447144 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2047988324 | None | 0.999 | N | 0.733 | 0.439 | 0.491996647052 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs2047988324 | None | 0.999 | N | 0.733 | 0.439 | 0.491996647052 | gnomAD-4.0.0 | 3.84754E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.18608E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1478 | likely_benign | 0.1303 | benign | -0.729 | Destabilizing | 0.981 | D | 0.488 | neutral | N | 0.49209684 | None | None | N |
T/C | 0.355 | ambiguous | 0.3108 | benign | -0.229 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
T/D | 0.7798 | likely_pathogenic | 0.734 | pathogenic | -0.147 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/E | 0.6668 | likely_pathogenic | 0.6192 | pathogenic | 0.003 | Stabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
T/F | 0.5777 | likely_pathogenic | 0.5282 | ambiguous | -0.741 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
T/G | 0.4512 | ambiguous | 0.3657 | ambiguous | -1.082 | Destabilizing | 0.997 | D | 0.597 | neutral | None | None | None | None | N |
T/H | 0.4476 | ambiguous | 0.4102 | ambiguous | -1.125 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
T/I | 0.3737 | ambiguous | 0.3487 | ambiguous | 0.171 | Stabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.489565626 | None | None | N |
T/K | 0.2871 | likely_benign | 0.2882 | benign | 0.151 | Stabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | N |
T/L | 0.094 | likely_benign | 0.0963 | benign | 0.171 | Stabilizing | 0.998 | D | 0.57 | neutral | None | None | None | None | N |
T/M | 0.128 | likely_benign | 0.1172 | benign | 0.052 | Stabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
T/N | 0.2232 | likely_benign | 0.186 | benign | -0.379 | Destabilizing | 0.999 | D | 0.631 | neutral | N | 0.511747617 | None | None | N |
T/P | 0.1664 | likely_benign | 0.1437 | benign | -0.098 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | N | 0.475055769 | None | None | N |
T/Q | 0.3559 | ambiguous | 0.3079 | benign | -0.216 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
T/R | 0.2421 | likely_benign | 0.2305 | benign | 0.002 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/S | 0.2419 | likely_benign | 0.1982 | benign | -0.712 | Destabilizing | 0.905 | D | 0.429 | neutral | N | 0.48753771 | None | None | N |
T/V | 0.2418 | likely_benign | 0.2294 | benign | -0.098 | Destabilizing | 0.998 | D | 0.506 | neutral | None | None | None | None | N |
T/W | 0.8845 | likely_pathogenic | 0.8613 | pathogenic | -0.84 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
T/Y | 0.5723 | likely_pathogenic | 0.5249 | ambiguous | -0.415 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.