Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22019 | 66280;66281;66282 | chr2:178582401;178582400;178582399 | chr2:179447128;179447127;179447126 |
N2AB | 20378 | 61357;61358;61359 | chr2:178582401;178582400;178582399 | chr2:179447128;179447127;179447126 |
N2A | 19451 | 58576;58577;58578 | chr2:178582401;178582400;178582399 | chr2:179447128;179447127;179447126 |
N2B | 12954 | 39085;39086;39087 | chr2:178582401;178582400;178582399 | chr2:179447128;179447127;179447126 |
Novex-1 | 13079 | 39460;39461;39462 | chr2:178582401;178582400;178582399 | chr2:179447128;179447127;179447126 |
Novex-2 | 13146 | 39661;39662;39663 | chr2:178582401;178582400;178582399 | chr2:179447128;179447127;179447126 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs1164328228 | None | 0.97 | N | 0.61 | 0.366 | 0.48748946032 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.88 | likely_pathogenic | 0.884 | pathogenic | 0.065 | Stabilizing | 0.86 | D | 0.457 | neutral | None | None | None | None | N |
K/C | 0.9376 | likely_pathogenic | 0.9157 | pathogenic | -0.276 | Destabilizing | 0.998 | D | 0.664 | neutral | None | None | None | None | N |
K/D | 0.8868 | likely_pathogenic | 0.8909 | pathogenic | -0.202 | Destabilizing | 0.978 | D | 0.469 | neutral | None | None | None | None | N |
K/E | 0.8132 | likely_pathogenic | 0.8276 | pathogenic | -0.202 | Destabilizing | 0.822 | D | 0.469 | neutral | N | 0.496084732 | None | None | N |
K/F | 0.972 | likely_pathogenic | 0.9745 | pathogenic | -0.165 | Destabilizing | 0.993 | D | 0.607 | neutral | None | None | None | None | N |
K/G | 0.7824 | likely_pathogenic | 0.7352 | pathogenic | -0.104 | Destabilizing | 0.019 | N | 0.317 | neutral | None | None | None | None | N |
K/H | 0.538 | ambiguous | 0.5092 | ambiguous | -0.226 | Destabilizing | 0.994 | D | 0.499 | neutral | None | None | None | None | N |
K/I | 0.9373 | likely_pathogenic | 0.9472 | pathogenic | 0.434 | Stabilizing | 0.97 | D | 0.61 | neutral | N | 0.500869025 | None | None | N |
K/L | 0.8553 | likely_pathogenic | 0.8694 | pathogenic | 0.434 | Stabilizing | 0.956 | D | 0.427 | neutral | None | None | None | None | N |
K/M | 0.7654 | likely_pathogenic | 0.7833 | pathogenic | 0.054 | Stabilizing | 0.998 | D | 0.503 | neutral | None | None | None | None | N |
K/N | 0.7516 | likely_pathogenic | 0.7545 | pathogenic | 0.161 | Stabilizing | 0.942 | D | 0.457 | neutral | N | 0.4732638 | None | None | N |
K/P | 0.9676 | likely_pathogenic | 0.9656 | pathogenic | 0.337 | Stabilizing | 0.993 | D | 0.496 | neutral | None | None | None | None | N |
K/Q | 0.5103 | ambiguous | 0.5025 | ambiguous | 0.007 | Stabilizing | 0.942 | D | 0.52 | neutral | N | 0.484459837 | None | None | N |
K/R | 0.1282 | likely_benign | 0.1179 | benign | -0.011 | Destabilizing | 0.014 | N | 0.125 | neutral | N | 0.461396155 | None | None | N |
K/S | 0.8868 | likely_pathogenic | 0.8894 | pathogenic | -0.226 | Destabilizing | 0.86 | D | 0.453 | neutral | None | None | None | None | N |
K/T | 0.7723 | likely_pathogenic | 0.7915 | pathogenic | -0.097 | Destabilizing | 0.942 | D | 0.447 | neutral | N | 0.484966816 | None | None | N |
K/V | 0.9088 | likely_pathogenic | 0.9195 | pathogenic | 0.337 | Stabilizing | 0.978 | D | 0.511 | neutral | None | None | None | None | N |
K/W | 0.9518 | likely_pathogenic | 0.9514 | pathogenic | -0.239 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/Y | 0.8783 | likely_pathogenic | 0.8736 | pathogenic | 0.108 | Stabilizing | 0.993 | D | 0.559 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.