Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22033 | 66322;66323;66324 | chr2:178582359;178582358;178582357 | chr2:179447086;179447085;179447084 |
N2AB | 20392 | 61399;61400;61401 | chr2:178582359;178582358;178582357 | chr2:179447086;179447085;179447084 |
N2A | 19465 | 58618;58619;58620 | chr2:178582359;178582358;178582357 | chr2:179447086;179447085;179447084 |
N2B | 12968 | 39127;39128;39129 | chr2:178582359;178582358;178582357 | chr2:179447086;179447085;179447084 |
Novex-1 | 13093 | 39502;39503;39504 | chr2:178582359;178582358;178582357 | chr2:179447086;179447085;179447084 |
Novex-2 | 13160 | 39703;39704;39705 | chr2:178582359;178582358;178582357 | chr2:179447086;179447085;179447084 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs768277403 | -1.395 | 0.998 | N | 0.413 | 0.294 | 0.250039746154 | gnomAD-2.1.1 | 3.24E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 2.65869E-04 | None | 0 | 0 | 0 |
E/D | rs768277403 | -1.395 | 0.998 | N | 0.413 | 0.294 | 0.250039746154 | gnomAD-4.0.0 | 1.30303E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.09952E-04 | 1.66107E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5682 | likely_pathogenic | 0.5334 | ambiguous | -0.724 | Destabilizing | 0.996 | D | 0.554 | neutral | N | 0.467201275 | None | None | I |
E/C | 0.9634 | likely_pathogenic | 0.9575 | pathogenic | -0.632 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
E/D | 0.9496 | likely_pathogenic | 0.9447 | pathogenic | -1.454 | Destabilizing | 0.998 | D | 0.413 | neutral | N | 0.492764722 | None | None | I |
E/F | 0.9864 | likely_pathogenic | 0.9853 | pathogenic | -1.032 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
E/G | 0.8449 | likely_pathogenic | 0.833 | pathogenic | -1.057 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | N | 0.501158513 | None | None | I |
E/H | 0.9627 | likely_pathogenic | 0.9574 | pathogenic | -1.303 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
E/I | 0.726 | likely_pathogenic | 0.7021 | pathogenic | 0.175 | Stabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
E/K | 0.6197 | likely_pathogenic | 0.6022 | pathogenic | -0.917 | Destabilizing | 0.767 | D | 0.309 | neutral | N | 0.472659004 | None | None | I |
E/L | 0.9298 | likely_pathogenic | 0.9176 | pathogenic | 0.175 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
E/M | 0.8162 | likely_pathogenic | 0.7896 | pathogenic | 0.665 | Stabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
E/N | 0.9427 | likely_pathogenic | 0.9446 | pathogenic | -1.157 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | I |
E/P | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
E/Q | 0.2231 | likely_benign | 0.2209 | benign | -0.977 | Destabilizing | 0.996 | D | 0.531 | neutral | N | 0.49970104 | None | None | I |
E/R | 0.751 | likely_pathogenic | 0.7317 | pathogenic | -0.954 | Destabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | I |
E/S | 0.7603 | likely_pathogenic | 0.7581 | pathogenic | -1.602 | Destabilizing | 0.997 | D | 0.459 | neutral | None | None | None | None | I |
E/T | 0.7505 | likely_pathogenic | 0.7415 | pathogenic | -1.302 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
E/V | 0.4045 | ambiguous | 0.3917 | ambiguous | -0.103 | Destabilizing | 0.999 | D | 0.779 | deleterious | N | 0.415172715 | None | None | I |
E/W | 0.9975 | likely_pathogenic | 0.9973 | pathogenic | -1.242 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
E/Y | 0.9863 | likely_pathogenic | 0.9834 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.