Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22036 | 66331;66332;66333 | chr2:178582350;178582349;178582348 | chr2:179447077;179447076;179447075 |
N2AB | 20395 | 61408;61409;61410 | chr2:178582350;178582349;178582348 | chr2:179447077;179447076;179447075 |
N2A | 19468 | 58627;58628;58629 | chr2:178582350;178582349;178582348 | chr2:179447077;179447076;179447075 |
N2B | 12971 | 39136;39137;39138 | chr2:178582350;178582349;178582348 | chr2:179447077;179447076;179447075 |
Novex-1 | 13096 | 39511;39512;39513 | chr2:178582350;178582349;178582348 | chr2:179447077;179447076;179447075 |
Novex-2 | 13163 | 39712;39713;39714 | chr2:178582350;178582349;178582348 | chr2:179447077;179447076;179447075 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 0.994 | N | 0.613 | 0.355 | 0.292423486923 | gnomAD-4.0.0 | 6.86201E-07 | None | None | None | None | I | None | 3.00409E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/N | rs758640229 | -0.024 | 0.994 | N | 0.677 | 0.431 | 0.457741393631 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
Y/N | rs758640229 | -0.024 | 0.994 | N | 0.677 | 0.431 | 0.457741393631 | gnomAD-4.0.0 | 6.86201E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01421E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9572 | likely_pathogenic | 0.9498 | pathogenic | -0.563 | Destabilizing | 0.916 | D | 0.639 | neutral | None | None | None | None | I |
Y/C | 0.6804 | likely_pathogenic | 0.6802 | pathogenic | 0.118 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | N | 0.51268898 | None | None | I |
Y/D | 0.9432 | likely_pathogenic | 0.9467 | pathogenic | 0.981 | Stabilizing | 0.994 | D | 0.677 | prob.neutral | N | 0.512929211 | None | None | I |
Y/E | 0.9841 | likely_pathogenic | 0.9835 | pathogenic | 0.957 | Stabilizing | 0.996 | D | 0.666 | neutral | None | None | None | None | I |
Y/F | 0.1266 | likely_benign | 0.1226 | benign | -0.294 | Destabilizing | 0.892 | D | 0.565 | neutral | N | 0.481539354 | None | None | I |
Y/G | 0.9673 | likely_pathogenic | 0.9604 | pathogenic | -0.739 | Destabilizing | 0.987 | D | 0.667 | neutral | None | None | None | None | I |
Y/H | 0.7073 | likely_pathogenic | 0.6676 | pathogenic | 0.284 | Stabilizing | 0.994 | D | 0.613 | neutral | N | 0.468606853 | None | None | I |
Y/I | 0.8049 | likely_pathogenic | 0.8105 | pathogenic | -0.133 | Destabilizing | 0.073 | N | 0.475 | neutral | None | None | None | None | I |
Y/K | 0.9878 | likely_pathogenic | 0.984 | pathogenic | 0.285 | Stabilizing | 0.987 | D | 0.668 | neutral | None | None | None | None | I |
Y/L | 0.8582 | likely_pathogenic | 0.8542 | pathogenic | -0.133 | Destabilizing | 0.437 | N | 0.602 | neutral | None | None | None | None | I |
Y/M | 0.8752 | likely_pathogenic | 0.8838 | pathogenic | -0.029 | Destabilizing | 0.993 | D | 0.622 | neutral | None | None | None | None | I |
Y/N | 0.7789 | likely_pathogenic | 0.769 | pathogenic | 0.099 | Stabilizing | 0.994 | D | 0.677 | prob.neutral | N | 0.467592895 | None | None | I |
Y/P | 0.9956 | likely_pathogenic | 0.9963 | pathogenic | -0.256 | Destabilizing | 0.996 | D | 0.691 | prob.neutral | None | None | None | None | I |
Y/Q | 0.9721 | likely_pathogenic | 0.9673 | pathogenic | 0.142 | Stabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | I |
Y/R | 0.9696 | likely_pathogenic | 0.958 | pathogenic | 0.522 | Stabilizing | 0.996 | D | 0.681 | prob.neutral | None | None | None | None | I |
Y/S | 0.9119 | likely_pathogenic | 0.9051 | pathogenic | -0.338 | Destabilizing | 0.983 | D | 0.651 | neutral | N | 0.496834093 | None | None | I |
Y/T | 0.962 | likely_pathogenic | 0.9582 | pathogenic | -0.269 | Destabilizing | 0.975 | D | 0.639 | neutral | None | None | None | None | I |
Y/V | 0.7938 | likely_pathogenic | 0.8014 | pathogenic | -0.256 | Destabilizing | 0.653 | D | 0.597 | neutral | None | None | None | None | I |
Y/W | 0.638 | likely_pathogenic | 0.6143 | pathogenic | -0.442 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.