Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22046 | 66361;66362;66363 | chr2:178582320;178582319;178582318 | chr2:179447047;179447046;179447045 |
N2AB | 20405 | 61438;61439;61440 | chr2:178582320;178582319;178582318 | chr2:179447047;179447046;179447045 |
N2A | 19478 | 58657;58658;58659 | chr2:178582320;178582319;178582318 | chr2:179447047;179447046;179447045 |
N2B | 12981 | 39166;39167;39168 | chr2:178582320;178582319;178582318 | chr2:179447047;179447046;179447045 |
Novex-1 | 13106 | 39541;39542;39543 | chr2:178582320;178582319;178582318 | chr2:179447047;179447046;179447045 |
Novex-2 | 13173 | 39742;39743;39744 | chr2:178582320;178582319;178582318 | chr2:179447047;179447046;179447045 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.666 | D | 0.723 | 0.465 | 0.595302103986 | gnomAD-4.0.0 | 6.96131E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.07406E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0788 | likely_benign | 0.0651 | benign | -0.739 | Destabilizing | 0.051 | N | 0.317 | neutral | N | 0.491676583 | None | None | N |
P/C | 0.6353 | likely_pathogenic | 0.5365 | ambiguous | -0.573 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
P/D | 0.716 | likely_pathogenic | 0.6264 | pathogenic | -0.69 | Destabilizing | 0.841 | D | 0.621 | neutral | None | None | None | None | N |
P/E | 0.5195 | ambiguous | 0.4286 | ambiguous | -0.803 | Destabilizing | 0.841 | D | 0.603 | neutral | None | None | None | None | N |
P/F | 0.7894 | likely_pathogenic | 0.7237 | pathogenic | -0.899 | Destabilizing | 0.974 | D | 0.823 | deleterious | None | None | None | None | N |
P/G | 0.4613 | ambiguous | 0.359 | ambiguous | -0.902 | Destabilizing | 0.725 | D | 0.65 | prob.neutral | None | None | None | None | N |
P/H | 0.4758 | ambiguous | 0.3721 | ambiguous | -0.438 | Destabilizing | 0.998 | D | 0.758 | deleterious | None | None | None | None | N |
P/I | 0.4787 | ambiguous | 0.434 | ambiguous | -0.451 | Destabilizing | 0.949 | D | 0.776 | deleterious | None | None | None | None | N |
P/K | 0.5628 | ambiguous | 0.4511 | ambiguous | -0.644 | Destabilizing | 0.841 | D | 0.599 | neutral | None | None | None | None | N |
P/L | 0.2846 | likely_benign | 0.2467 | benign | -0.451 | Destabilizing | 0.666 | D | 0.723 | deleterious | D | 0.52768451 | None | None | N |
P/M | 0.472 | ambiguous | 0.4174 | ambiguous | -0.337 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
P/N | 0.5353 | ambiguous | 0.4629 | ambiguous | -0.314 | Destabilizing | 0.949 | D | 0.674 | prob.neutral | None | None | None | None | N |
P/Q | 0.3875 | ambiguous | 0.3043 | benign | -0.617 | Destabilizing | 0.966 | D | 0.681 | prob.neutral | N | 0.494830135 | None | None | N |
P/R | 0.4808 | ambiguous | 0.374 | ambiguous | -0.025 | Destabilizing | 0.933 | D | 0.725 | deleterious | N | 0.509073276 | None | None | N |
P/S | 0.2066 | likely_benign | 0.1574 | benign | -0.665 | Destabilizing | 0.051 | N | 0.323 | neutral | N | 0.487802243 | None | None | N |
P/T | 0.1532 | likely_benign | 0.138 | benign | -0.685 | Destabilizing | 0.051 | N | 0.313 | neutral | N | 0.48361196 | None | None | N |
P/V | 0.2952 | likely_benign | 0.2662 | benign | -0.512 | Destabilizing | 0.725 | D | 0.657 | prob.neutral | None | None | None | None | N |
P/W | 0.8982 | likely_pathogenic | 0.8488 | pathogenic | -0.969 | Destabilizing | 0.998 | D | 0.782 | deleterious | None | None | None | None | N |
P/Y | 0.7548 | likely_pathogenic | 0.6631 | pathogenic | -0.685 | Destabilizing | 0.991 | D | 0.822 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.