Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22048 | 66367;66368;66369 | chr2:178582314;178582313;178582312 | chr2:179447041;179447040;179447039 |
N2AB | 20407 | 61444;61445;61446 | chr2:178582314;178582313;178582312 | chr2:179447041;179447040;179447039 |
N2A | 19480 | 58663;58664;58665 | chr2:178582314;178582313;178582312 | chr2:179447041;179447040;179447039 |
N2B | 12983 | 39172;39173;39174 | chr2:178582314;178582313;178582312 | chr2:179447041;179447040;179447039 |
Novex-1 | 13108 | 39547;39548;39549 | chr2:178582314;178582313;178582312 | chr2:179447041;179447040;179447039 |
Novex-2 | 13175 | 39748;39749;39750 | chr2:178582314;178582313;178582312 | chr2:179447041;179447040;179447039 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs980906933 | None | 0.001 | N | 0.217 | 0.073 | 0.192905019026 | gnomAD-4.0.0 | 6.66274E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.49128E-04 | 8.84215E-06 | 0 | 0 |
I/N | None | None | 0.162 | N | 0.541 | 0.174 | 0.690481662768 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
I/V | rs1282316821 | None | None | N | 0.1 | 0.061 | 0.194818534648 | gnomAD-4.0.0 | 1.66088E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94291E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2174 | likely_benign | 0.1684 | benign | -1.08 | Destabilizing | 0.007 | N | 0.438 | neutral | None | None | None | None | N |
I/C | 0.6699 | likely_pathogenic | 0.5895 | pathogenic | -0.63 | Destabilizing | 0.492 | N | 0.355 | neutral | None | None | None | None | N |
I/D | 0.7944 | likely_pathogenic | 0.6994 | pathogenic | -0.683 | Destabilizing | 0.068 | N | 0.547 | neutral | None | None | None | None | N |
I/E | 0.5383 | ambiguous | 0.4432 | ambiguous | -0.756 | Destabilizing | 0.035 | N | 0.479 | neutral | None | None | None | None | N |
I/F | 0.1698 | likely_benign | 0.1461 | benign | -0.914 | Destabilizing | 0.087 | N | 0.389 | neutral | N | 0.478776568 | None | None | N |
I/G | 0.6778 | likely_pathogenic | 0.5822 | pathogenic | -1.306 | Destabilizing | 0.068 | N | 0.487 | neutral | None | None | None | None | N |
I/H | 0.5281 | ambiguous | 0.4501 | ambiguous | -0.536 | Destabilizing | 0.747 | D | 0.421 | neutral | None | None | None | None | N |
I/K | 0.304 | likely_benign | 0.2504 | benign | -0.706 | Destabilizing | None | N | 0.425 | neutral | None | None | None | None | N |
I/L | 0.1107 | likely_benign | 0.0978 | benign | -0.583 | Destabilizing | 0.002 | N | 0.239 | neutral | N | 0.493802149 | None | None | N |
I/M | 0.1041 | likely_benign | 0.0944 | benign | -0.432 | Destabilizing | 0.001 | N | 0.217 | neutral | N | 0.475008531 | None | None | N |
I/N | 0.401 | ambiguous | 0.3188 | benign | -0.438 | Destabilizing | 0.162 | N | 0.541 | neutral | N | 0.479790526 | None | None | N |
I/P | 0.6335 | likely_pathogenic | 0.5089 | ambiguous | -0.715 | Destabilizing | 0.204 | N | 0.529 | neutral | None | None | None | None | N |
I/Q | 0.3801 | ambiguous | 0.3067 | benign | -0.698 | Destabilizing | 0.112 | N | 0.533 | neutral | None | None | None | None | N |
I/R | 0.2605 | likely_benign | 0.2081 | benign | -0.048 | Destabilizing | 0.018 | N | 0.549 | neutral | None | None | None | None | N |
I/S | 0.3148 | likely_benign | 0.2404 | benign | -0.915 | Destabilizing | 0.013 | N | 0.392 | neutral | N | 0.4780161 | None | None | N |
I/T | 0.106 | likely_benign | 0.0874 | benign | -0.882 | Destabilizing | None | N | 0.375 | neutral | N | 0.477255631 | None | None | N |
I/V | 0.0551 | likely_benign | 0.0536 | benign | -0.715 | Destabilizing | None | N | 0.1 | neutral | N | 0.458844213 | None | None | N |
I/W | 0.785 | likely_pathogenic | 0.7204 | pathogenic | -0.931 | Destabilizing | 0.747 | D | 0.527 | neutral | None | None | None | None | N |
I/Y | 0.5502 | ambiguous | 0.4596 | ambiguous | -0.709 | Destabilizing | 0.204 | N | 0.484 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.