Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22051 | 66376;66377;66378 | chr2:178582305;178582304;178582303 | chr2:179447032;179447031;179447030 |
N2AB | 20410 | 61453;61454;61455 | chr2:178582305;178582304;178582303 | chr2:179447032;179447031;179447030 |
N2A | 19483 | 58672;58673;58674 | chr2:178582305;178582304;178582303 | chr2:179447032;179447031;179447030 |
N2B | 12986 | 39181;39182;39183 | chr2:178582305;178582304;178582303 | chr2:179447032;179447031;179447030 |
Novex-1 | 13111 | 39556;39557;39558 | chr2:178582305;178582304;178582303 | chr2:179447032;179447031;179447030 |
Novex-2 | 13178 | 39757;39758;39759 | chr2:178582305;178582304;178582303 | chr2:179447032;179447031;179447030 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | None | None | 0.007 | N | 0.403 | 0.237 | 0.227934060464 | gnomAD-4.0.0 | 1.66811E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.95074E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8663 | likely_pathogenic | 0.8016 | pathogenic | -0.46 | Destabilizing | 0.587 | D | 0.593 | neutral | None | None | None | None | N |
N/C | 0.883 | likely_pathogenic | 0.8052 | pathogenic | 0.216 | Stabilizing | 0.996 | D | 0.846 | deleterious | None | None | None | None | N |
N/D | 0.2809 | likely_benign | 0.2407 | benign | 0.308 | Stabilizing | 0.007 | N | 0.38 | neutral | N | 0.47368038 | None | None | N |
N/E | 0.9265 | likely_pathogenic | 0.8832 | pathogenic | 0.306 | Stabilizing | 0.587 | D | 0.657 | prob.neutral | None | None | None | None | N |
N/F | 0.8984 | likely_pathogenic | 0.8865 | pathogenic | -0.715 | Destabilizing | 0.953 | D | 0.741 | deleterious | None | None | None | None | N |
N/G | 0.8989 | likely_pathogenic | 0.8541 | pathogenic | -0.669 | Destabilizing | 0.74 | D | 0.673 | prob.neutral | None | None | None | None | N |
N/H | 0.4347 | ambiguous | 0.3903 | ambiguous | -0.563 | Destabilizing | 0.979 | D | 0.618 | neutral | D | 0.523935842 | None | None | N |
N/I | 0.6775 | likely_pathogenic | 0.6084 | pathogenic | 0.011 | Stabilizing | 0.883 | D | 0.774 | deleterious | D | 0.531459247 | None | None | N |
N/K | 0.9385 | likely_pathogenic | 0.8921 | pathogenic | 0.098 | Stabilizing | 0.682 | D | 0.667 | prob.neutral | N | 0.519855387 | None | None | N |
N/L | 0.7142 | likely_pathogenic | 0.658 | pathogenic | 0.011 | Stabilizing | 0.833 | D | 0.604 | neutral | None | None | None | None | N |
N/M | 0.7646 | likely_pathogenic | 0.7081 | pathogenic | 0.261 | Stabilizing | 0.996 | D | 0.739 | deleterious | None | None | None | None | N |
N/P | 0.9052 | likely_pathogenic | 0.8903 | pathogenic | -0.118 | Destabilizing | 0.953 | D | 0.757 | deleterious | None | None | None | None | N |
N/Q | 0.9092 | likely_pathogenic | 0.8547 | pathogenic | -0.386 | Destabilizing | 0.953 | D | 0.657 | prob.neutral | None | None | None | None | N |
N/R | 0.965 | likely_pathogenic | 0.9344 | pathogenic | 0.13 | Stabilizing | 0.909 | D | 0.679 | prob.neutral | None | None | None | None | N |
N/S | 0.3432 | ambiguous | 0.288 | benign | -0.29 | Destabilizing | 0.518 | D | 0.731 | deleterious | N | 0.49057263 | None | None | N |
N/T | 0.6209 | likely_pathogenic | 0.5185 | ambiguous | -0.125 | Destabilizing | 0.007 | N | 0.403 | neutral | N | 0.495938377 | None | None | N |
N/V | 0.7802 | likely_pathogenic | 0.695 | pathogenic | -0.118 | Destabilizing | 0.833 | D | 0.634 | neutral | None | None | None | None | N |
N/W | 0.9716 | likely_pathogenic | 0.9673 | pathogenic | -0.644 | Destabilizing | 0.996 | D | 0.879 | deleterious | None | None | None | None | N |
N/Y | 0.5221 | ambiguous | 0.4674 | ambiguous | -0.392 | Destabilizing | 0.979 | D | 0.721 | deleterious | N | 0.488900548 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.