Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22055 | 66388;66389;66390 | chr2:178582206;178582205;178582204 | chr2:179446933;179446932;179446931 |
N2AB | 20414 | 61465;61466;61467 | chr2:178582206;178582205;178582204 | chr2:179446933;179446932;179446931 |
N2A | 19487 | 58684;58685;58686 | chr2:178582206;178582205;178582204 | chr2:179446933;179446932;179446931 |
N2B | 12990 | 39193;39194;39195 | chr2:178582206;178582205;178582204 | chr2:179446933;179446932;179446931 |
Novex-1 | 13115 | 39568;39569;39570 | chr2:178582206;178582205;178582204 | chr2:179446933;179446932;179446931 |
Novex-2 | 13182 | 39769;39770;39771 | chr2:178582206;178582205;178582204 | chr2:179446933;179446932;179446931 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.104 | N | 0.433 | 0.19 | 0.380564188046 | gnomAD-4.0.0 | 6.9344E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03386E-07 | 0 | 0 |
P/Q | rs1286811365 | -0.017 | 0.924 | N | 0.463 | 0.278 | 0.359963025489 | gnomAD-2.1.1 | 4.36E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.36E-06 | 0 |
P/Q | rs1286811365 | -0.017 | 0.924 | N | 0.463 | 0.278 | 0.359963025489 | gnomAD-4.0.0 | 8.32128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.08406E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0887 | likely_benign | 0.0708 | benign | -0.361 | Destabilizing | 0.104 | N | 0.327 | neutral | N | 0.510107248 | None | None | N |
P/C | 0.4239 | ambiguous | 0.3669 | ambiguous | -0.523 | Destabilizing | 0.953 | D | 0.512 | neutral | None | None | None | None | N |
P/D | 0.8272 | likely_pathogenic | 0.7468 | pathogenic | -0.074 | Destabilizing | 0.822 | D | 0.468 | neutral | None | None | None | None | N |
P/E | 0.4315 | ambiguous | 0.3514 | ambiguous | -0.199 | Destabilizing | 0.603 | D | 0.441 | neutral | None | None | None | None | N |
P/F | 0.582 | likely_pathogenic | 0.465 | ambiguous | -0.8 | Destabilizing | 0.724 | D | 0.673 | prob.neutral | None | None | None | None | N |
P/G | 0.6071 | likely_pathogenic | 0.4706 | ambiguous | -0.459 | Destabilizing | 0.603 | D | 0.371 | neutral | None | None | None | None | N |
P/H | 0.3256 | likely_benign | 0.2422 | benign | -0.158 | Destabilizing | 0.984 | D | 0.442 | neutral | None | None | None | None | N |
P/I | 0.11 | likely_benign | 0.0928 | benign | -0.263 | Destabilizing | 0.05 | N | 0.408 | neutral | None | None | None | None | N |
P/K | 0.2788 | likely_benign | 0.2305 | benign | -0.063 | Destabilizing | 0.603 | D | 0.456 | neutral | None | None | None | None | N |
P/L | 0.0994 | likely_benign | 0.0816 | benign | -0.263 | Destabilizing | 0.104 | N | 0.433 | neutral | N | 0.493425642 | None | None | N |
P/M | 0.2374 | likely_benign | 0.1939 | benign | -0.163 | Destabilizing | 0.724 | D | 0.565 | neutral | None | None | None | None | N |
P/N | 0.5537 | ambiguous | 0.4372 | ambiguous | 0.156 | Stabilizing | 0.942 | D | 0.592 | neutral | None | None | None | None | N |
P/Q | 0.2004 | likely_benign | 0.1572 | benign | -0.13 | Destabilizing | 0.924 | D | 0.463 | neutral | N | 0.48595064 | None | None | N |
P/R | 0.2001 | likely_benign | 0.1585 | benign | 0.373 | Stabilizing | 0.8 | D | 0.602 | neutral | N | 0.472655323 | None | None | N |
P/S | 0.2373 | likely_benign | 0.1675 | benign | -0.215 | Destabilizing | 0.361 | N | 0.308 | neutral | N | 0.467592895 | None | None | N |
P/T | 0.0962 | likely_benign | 0.0704 | benign | -0.243 | Destabilizing | 0.189 | N | 0.299 | neutral | N | 0.484936681 | None | None | N |
P/V | 0.082 | likely_benign | 0.0683 | benign | -0.262 | Destabilizing | None | N | 0.145 | neutral | None | None | None | None | N |
P/W | 0.857 | likely_pathogenic | 0.7826 | pathogenic | -0.857 | Destabilizing | 0.984 | D | 0.61 | neutral | None | None | None | None | N |
P/Y | 0.6205 | likely_pathogenic | 0.4945 | ambiguous | -0.499 | Destabilizing | 0.842 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.