Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22059 | 66400;66401;66402 | chr2:178582194;178582193;178582192 | chr2:179446921;179446920;179446919 |
N2AB | 20418 | 61477;61478;61479 | chr2:178582194;178582193;178582192 | chr2:179446921;179446920;179446919 |
N2A | 19491 | 58696;58697;58698 | chr2:178582194;178582193;178582192 | chr2:179446921;179446920;179446919 |
N2B | 12994 | 39205;39206;39207 | chr2:178582194;178582193;178582192 | chr2:179446921;179446920;179446919 |
Novex-1 | 13119 | 39580;39581;39582 | chr2:178582194;178582193;178582192 | chr2:179446921;179446920;179446919 |
Novex-2 | 13186 | 39781;39782;39783 | chr2:178582194;178582193;178582192 | chr2:179446921;179446920;179446919 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | 0.078 | N | 0.461 | 0.316 | 0.299086750705 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.7176 | likely_pathogenic | 0.6261 | pathogenic | -1.113 | Destabilizing | 0.373 | N | 0.533 | neutral | None | None | None | None | N |
C/D | 0.9965 | likely_pathogenic | 0.9944 | pathogenic | -1.691 | Destabilizing | 0.91 | D | 0.695 | prob.neutral | None | None | None | None | N |
C/E | 0.9987 | likely_pathogenic | 0.9981 | pathogenic | -1.556 | Destabilizing | 0.91 | D | 0.693 | prob.neutral | None | None | None | None | N |
C/F | 0.9765 | likely_pathogenic | 0.9528 | pathogenic | -0.872 | Destabilizing | 0.979 | D | 0.717 | prob.delet. | N | 0.462171164 | None | None | N |
C/G | 0.7623 | likely_pathogenic | 0.6189 | pathogenic | -1.389 | Destabilizing | 0.684 | D | 0.639 | neutral | N | 0.461917675 | None | None | N |
C/H | 0.9968 | likely_pathogenic | 0.994 | pathogenic | -1.926 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | N |
C/I | 0.9319 | likely_pathogenic | 0.9086 | pathogenic | -0.417 | Destabilizing | 0.953 | D | 0.695 | prob.neutral | None | None | None | None | N |
C/K | 0.9995 | likely_pathogenic | 0.9992 | pathogenic | -0.96 | Destabilizing | 0.91 | D | 0.693 | prob.neutral | None | None | None | None | N |
C/L | 0.9234 | likely_pathogenic | 0.8972 | pathogenic | -0.417 | Destabilizing | 0.742 | D | 0.61 | neutral | None | None | None | None | N |
C/M | 0.9704 | likely_pathogenic | 0.9645 | pathogenic | 0.432 | Stabilizing | 0.996 | D | 0.685 | prob.neutral | None | None | None | None | N |
C/N | 0.9838 | likely_pathogenic | 0.9775 | pathogenic | -1.28 | Destabilizing | 0.91 | D | 0.704 | prob.neutral | None | None | None | None | N |
C/P | 0.3899 | ambiguous | 0.4045 | ambiguous | -0.624 | Destabilizing | 0.009 | N | 0.571 | neutral | None | None | None | None | N |
C/Q | 0.997 | likely_pathogenic | 0.9951 | pathogenic | -1.124 | Destabilizing | 0.953 | D | 0.743 | deleterious | None | None | None | None | N |
C/R | 0.9963 | likely_pathogenic | 0.993 | pathogenic | -1.152 | Destabilizing | 0.939 | D | 0.738 | prob.delet. | N | 0.462171164 | None | None | N |
C/S | 0.8237 | likely_pathogenic | 0.7528 | pathogenic | -1.44 | Destabilizing | 0.078 | N | 0.461 | neutral | N | 0.505373432 | None | None | N |
C/T | 0.8923 | likely_pathogenic | 0.8663 | pathogenic | -1.161 | Destabilizing | 0.742 | D | 0.606 | neutral | None | None | None | None | N |
C/V | 0.7983 | likely_pathogenic | 0.7718 | pathogenic | -0.624 | Destabilizing | 0.854 | D | 0.641 | neutral | None | None | None | None | N |
C/W | 0.997 | likely_pathogenic | 0.9939 | pathogenic | -1.287 | Destabilizing | 0.994 | D | 0.725 | prob.delet. | N | 0.462424654 | None | None | N |
C/Y | 0.9949 | likely_pathogenic | 0.9876 | pathogenic | -0.992 | Destabilizing | 0.979 | D | 0.721 | prob.delet. | N | 0.462171164 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.