Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2206 | 6841;6842;6843 | chr2:178775095;178775094;178775093 | chr2:179639822;179639821;179639820 |
N2AB | 2206 | 6841;6842;6843 | chr2:178775095;178775094;178775093 | chr2:179639822;179639821;179639820 |
N2A | 2206 | 6841;6842;6843 | chr2:178775095;178775094;178775093 | chr2:179639822;179639821;179639820 |
N2B | 2160 | 6703;6704;6705 | chr2:178775095;178775094;178775093 | chr2:179639822;179639821;179639820 |
Novex-1 | 2160 | 6703;6704;6705 | chr2:178775095;178775094;178775093 | chr2:179639822;179639821;179639820 |
Novex-2 | 2160 | 6703;6704;6705 | chr2:178775095;178775094;178775093 | chr2:179639822;179639821;179639820 |
Novex-3 | 2206 | 6841;6842;6843 | chr2:178775095;178775094;178775093 | chr2:179639822;179639821;179639820 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.999 | N | 0.587 | 0.428 | 0.339316883193 | gnomAD-4.0.0 | 1.59074E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85678E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.358 | ambiguous | 0.347 | ambiguous | -0.854 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/C | 0.6109 | likely_pathogenic | 0.5896 | pathogenic | -0.801 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
K/D | 0.7594 | likely_pathogenic | 0.7558 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
K/E | 0.2518 | likely_benign | 0.2478 | benign | -0.556 | Destabilizing | 0.999 | D | 0.607 | neutral | N | 0.506384919 | None | None | N |
K/F | 0.7469 | likely_pathogenic | 0.7289 | pathogenic | -0.078 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
K/G | 0.5896 | likely_pathogenic | 0.572 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
K/H | 0.2743 | likely_benign | 0.2645 | benign | -1.466 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
K/I | 0.2898 | likely_benign | 0.2792 | benign | 0.392 | Stabilizing | 1.0 | D | 0.845 | deleterious | D | 0.533736486 | None | None | N |
K/L | 0.3088 | likely_benign | 0.2912 | benign | 0.392 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
K/M | 0.2054 | likely_benign | 0.1952 | benign | 0.092 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
K/N | 0.4627 | ambiguous | 0.4636 | ambiguous | -1.122 | Destabilizing | 1.0 | D | 0.743 | deleterious | D | 0.592938095 | None | None | N |
K/P | 0.9818 | likely_pathogenic | 0.9797 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
K/Q | 0.1263 | likely_benign | 0.1217 | benign | -0.934 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.509454536 | None | None | N |
K/R | 0.0916 | likely_benign | 0.0881 | benign | -0.956 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.498357913 | None | None | N |
K/S | 0.4003 | ambiguous | 0.3915 | ambiguous | -1.674 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | N |
K/T | 0.1467 | likely_benign | 0.1421 | benign | -1.231 | Destabilizing | 1.0 | D | 0.77 | deleterious | N | 0.482561214 | None | None | N |
K/V | 0.2828 | likely_benign | 0.2679 | benign | 0.004 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
K/W | 0.7906 | likely_pathogenic | 0.7717 | pathogenic | -0.07 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
K/Y | 0.6586 | likely_pathogenic | 0.641 | pathogenic | 0.209 | Stabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.