Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22068 | 66427;66428;66429 | chr2:178582167;178582166;178582165 | chr2:179446894;179446893;179446892 |
N2AB | 20427 | 61504;61505;61506 | chr2:178582167;178582166;178582165 | chr2:179446894;179446893;179446892 |
N2A | 19500 | 58723;58724;58725 | chr2:178582167;178582166;178582165 | chr2:179446894;179446893;179446892 |
N2B | 13003 | 39232;39233;39234 | chr2:178582167;178582166;178582165 | chr2:179446894;179446893;179446892 |
Novex-1 | 13128 | 39607;39608;39609 | chr2:178582167;178582166;178582165 | chr2:179446894;179446893;179446892 |
Novex-2 | 13195 | 39808;39809;39810 | chr2:178582167;178582166;178582165 | chr2:179446894;179446893;179446892 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.642 | N | 0.509 | 0.354 | 0.4018988957 | gnomAD-4.0.0 | 1.59372E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86049E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2878 | likely_benign | 0.3093 | benign | -0.541 | Destabilizing | 0.174 | N | 0.458 | neutral | N | 0.50788338 | None | None | N |
T/C | 0.7217 | likely_pathogenic | 0.7201 | pathogenic | -0.465 | Destabilizing | 0.991 | D | 0.509 | neutral | None | None | None | None | N |
T/D | 0.8551 | likely_pathogenic | 0.8309 | pathogenic | -1.697 | Destabilizing | 0.404 | N | 0.493 | neutral | None | None | None | None | N |
T/E | 0.8519 | likely_pathogenic | 0.8337 | pathogenic | -1.609 | Destabilizing | 0.575 | D | 0.495 | neutral | None | None | None | None | N |
T/F | 0.8173 | likely_pathogenic | 0.8034 | pathogenic | -0.34 | Destabilizing | 0.826 | D | 0.562 | neutral | None | None | None | None | N |
T/G | 0.3893 | ambiguous | 0.3713 | ambiguous | -0.877 | Destabilizing | 0.404 | N | 0.473 | neutral | None | None | None | None | N |
T/H | 0.7084 | likely_pathogenic | 0.673 | pathogenic | -1.337 | Destabilizing | 0.947 | D | 0.546 | neutral | None | None | None | None | N |
T/I | 0.893 | likely_pathogenic | 0.9027 | pathogenic | 0.295 | Stabilizing | 0.642 | D | 0.509 | neutral | N | 0.500583218 | None | None | N |
T/K | 0.7056 | likely_pathogenic | 0.6695 | pathogenic | -0.953 | Destabilizing | 0.404 | N | 0.506 | neutral | None | None | None | None | N |
T/L | 0.4645 | ambiguous | 0.4623 | ambiguous | 0.295 | Stabilizing | 0.189 | N | 0.447 | neutral | None | None | None | None | N |
T/M | 0.3497 | ambiguous | 0.3472 | ambiguous | 0.537 | Stabilizing | 0.088 | N | 0.469 | neutral | None | None | None | None | N |
T/N | 0.4121 | ambiguous | 0.3948 | ambiguous | -1.359 | Destabilizing | 0.007 | N | 0.327 | neutral | N | 0.502648132 | None | None | N |
T/P | 0.9309 | likely_pathogenic | 0.9177 | pathogenic | 0.049 | Stabilizing | 0.879 | D | 0.523 | neutral | N | 0.515724958 | None | None | N |
T/Q | 0.5808 | likely_pathogenic | 0.57 | pathogenic | -1.319 | Destabilizing | 0.826 | D | 0.525 | neutral | None | None | None | None | N |
T/R | 0.6221 | likely_pathogenic | 0.5942 | pathogenic | -0.937 | Destabilizing | 0.826 | D | 0.533 | neutral | None | None | None | None | N |
T/S | 0.2009 | likely_benign | 0.2038 | benign | -1.326 | Destabilizing | 0.013 | N | 0.305 | neutral | N | 0.46891956 | None | None | N |
T/V | 0.7036 | likely_pathogenic | 0.7281 | pathogenic | 0.049 | Stabilizing | 0.404 | N | 0.457 | neutral | None | None | None | None | N |
T/W | 0.9596 | likely_pathogenic | 0.9481 | pathogenic | -0.589 | Destabilizing | 0.991 | D | 0.57 | neutral | None | None | None | None | N |
T/Y | 0.8415 | likely_pathogenic | 0.8222 | pathogenic | -0.244 | Destabilizing | 0.906 | D | 0.57 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.